RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 EGR3Q06889 387 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 SNTB2Q13425 540 aaKnown RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 ZNF684Q5T5D7 378 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 KRT77Q7Z794 578 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 LHFPL3Q86UP9 236 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 ZNF679Q8IYX0 411 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 ACBD7Q8N6N7 88 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 NUP37Q8NFH4 326 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 ZNF799Q96GE5 643 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 OR8B4Q96RC9 309 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 KCNJ15Q99712 375 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 MROQ9BYG7 248 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 PLEKHF2Q9H8W4 249 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 ELOVL3Q9HB03 270 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 FGF20Q9NP95 211 aaPredicted RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 CISD1Q9NZ45 108 aaKnown RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 MRM2Q9UI43 246 aaKnown RBP10.92□□□□□ -0.66
SMN1-202ENST00000380707 SPEF1Q9Y4P9 236 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
SMN1-202ENST00000380707 EFCAB10A6NFE3 127 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 SMPD2O60906 423 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 SLC2A1P11166 492 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
SMN1-202ENST00000380707 DCKP27707 260 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 HSD11B1P28845 292 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 RAD52P43351 418 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 CX3CR1P49238 355 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 TPTEP56180 551 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ERVS71-1P61550 626 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 CSNK2BP67870 215 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ST3GAL4Q11206 333 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 DEGS2Q6QHC5 323 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 VHLLQ6RSH7 139 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ARL9Q6T311 187 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 RFPL4BQ6ZWI9 263 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ZNF540Q8NDQ6 660 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ABHD4Q8TB40 342 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 TMEM171Q8WVE6 324 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 SGCDQ92629 289 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 DCLRE1CQ96SD1 692 aaKnown RBP10.91□□□□□ -0.66
SMN1-202ENST00000380707 C1QTNF5Q9BXJ0 243 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 CA10Q9NS85 328 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 TBCCD1Q9NVR7 557 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 FKBP14Q9NWM8 211 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 ERVK13-1Q9NX77 482 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 CNOT2Q9NZN8 540 aaKnown RBP10.91□□□□□ -0.66
SMN1-202ENST00000380707 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 LRRC42Q9Y546 428 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 AKAP6Q13023 2319 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 PDZD2O15018 2839 aa10.91□□□□□ -0.66
SMN1-202ENST00000380707 C5orf63A6NC05 138 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 PTGES3LE9PB15 166 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 HS3ST1O14792 307 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 ZNF254O75437 659 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 LIMS3P0CW19 117 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 LIMS4P0CW20 117 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 C21orf33P30042 268 aaPredicted RBP10.9□□□□□ -0.66
SMN1-202ENST00000380707 THBS4P35443 961 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 GLRXP35754 106 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 SLC6A9P48067 706 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 ETV1P50549 477 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 GALEQ14376 348 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 MSMPQ1L6U9 139 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 SPATA46Q5T0L3 261 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 DRAM2Q6UX65 266 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 PLEKHG7Q6ZR37 379 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 AHSA2Q719I0 299 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 ZNF786Q8N393 782 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 ZNF283Q8N7M2 679 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 TMEM80Q96HE8 168 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 DOK1Q99704 481 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 JAM3Q9BX67 310 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 BCL2L14Q9BZR8 327 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 POFUT1Q9H488 388 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 UBTD1Q9HAC8 227 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 PAK1IP1Q9NWT1 392 aaPredicted RBP10.9□□□□□ -0.66
SMN1-202ENST00000380707 DIMT1Q9UNQ2 313 aaKnown RBP10.9□□□□□ -0.66
SMN1-202ENST00000380707 STARD10Q9Y365 291 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 N6AMT1Q9Y5N5 214 aa10.9□□□□□ -0.66
SMN1-202ENST00000380707 IRGMA1A4Y4 181 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 METTL15A6NJ78 407 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 SULT1C4O75897 302 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 LCATP04180 440 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 KRT8P05787 483 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 LCKP06239 509 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 CRHBPP24387 322 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 RGS6P49758 472 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 RIDAP52758 137 aaKnown RBP10.89□□□□□ -0.67
SMN1-202ENST00000380707 OR12D2P58182 307 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
SMN1-202ENST00000380707 PPP1CBP62140 327 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 MED21Q13503 144 aa10.89□□□□□ -0.67
SMN1-202ENST00000380707 ADIPOQQ15848 244 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms