RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IGHV5-51A0A0C4DH38 117 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 FAAP20Q6NZ36 180 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ANGPTL5Q86XS5 388 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 CMTM4Q8IZR5 234 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 PIGTQ969N2 578 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 DHRS9Q9BPW9 319 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 NUDT9Q9BW91 350 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 SLC39A9Q9NUM3 307 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 IGHV1OR21-1A0A087WYE8 117 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 AKR7A2O43488 359 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TNFSF12O43508 249 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 MOSPD3O75425 235 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ACHEP22303 614 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 LAP3P28838 519 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
NPHP4-201ENST00000378156 FAM71CQ8NEG0 241 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 OR51S1Q8NGJ8 323 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 OR1N1Q8NGS0 311 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 C14orf79Q96F83 325 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 NKX2-2O95096 273 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 HLA-HP01893 362 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 GZMKP49863 264 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 CLDN20P56880 219 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 IAH1Q2TAA2 248 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-201ENST00000378156 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TMEM81Q6P7N7 255 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ZNF705AQ6ZN79 300 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-201ENST00000378156 S100A7AQ86SG5 101 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ADGRE4PQ86SQ3 457 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 MED29Q9NX70 200 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ING1Q9UK53 422 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-201ENST00000378156 FLVCR2Q9UPI3 526 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 FITM1A5D6W6 292 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 BET1O15155 118 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 CD53P19397 219 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 THEM4Q5T1C6 240 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ZNF439Q8NDP4 499 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 RNF170Q96K19 258 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 DERL3Q96Q80 235 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TXNIPQ9H3M7 391 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■■■■□ 23.4
NPHP4-201ENST00000378156 PCDHB10Q9UN67 800 aa13.61□□□□□ -0.23
NPHP4-201ENST00000378156 EXO1Q9UQ84 846 aaKnown RBP13.61□□□□□ -0.23
NPHP4-201ENST00000378156 TGOLN2O43493 480 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 GABRB1P18505 474 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 BCKDHBP21953 392 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 RFX2P48378 723 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 CATR1Q13166 79 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 SLC10A1Q14973 349 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 GUSBP11Q6P575 273 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 WDR88Q6ZMY6 472 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 PRSS41Q7RTY9 318 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 OR4D11Q8NGI4 311 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 NANPQ8TBE9 248 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-201ENST00000378156 TRAPPC2LQ9UL33 140 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 TRAPPC4Q9Y296 219 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 BHLHE40O14503 412 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 TAAR5O14804 337 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 FAM199XQ6PEV8 388 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-201ENST00000378156 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 AUNIPQ9H7T9 357 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 PRSS37A4D1T9 235 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 IFITM5A6NNB3 132 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 GLIPR1L1Q6UWM5 242 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 OR8D4Q8NGM9 314 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 EXOSC3Q9NQT5 275 aaKnown RBP13.6□□□□□ -0.23
NPHP4-201ENST00000378156 CCDC163A0A0D9SF12 145 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 CXCL13O43927 109 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 CALCBP10092 127 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 NXPH1P58417 271 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 SCPEP1Q9HB40 452 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 PIGLQ9Y2B2 252 aa13.6□□□□□ -0.23
NPHP4-201ENST00000378156 LOC107986453A0A1B0GWG9 222 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 NPIPB8E9PQR5 432 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 FGF9P31371 208 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 DOK3Q7L591 496 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 OR4C3Q8NH37 302 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 ANKRD9Q96BM1 317 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 DEFB127Q9H1M4 99 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 FBXO34Q9NWN3 711 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 AHCTF1Q8WYP5 2266 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 DFFBO76075 338 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 CHRM2P08172 466 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 AARDQ4LEZ3 155 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SPACA9Q96E40 222 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 PLXNB2O15031 1838 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SFRP5Q5T4F7 317 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 C1orf87Q8N0U7 546 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms