RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TEX15Q9BXT5 2789 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 F5H5K5 113 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 M0R135 149 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 PHYHO14832 338 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 IGHV3-13P01766 116 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ALOX5APP20292 161 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ERVS71-1P61550 626 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 DHRSXQ8N5I4 330 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
CKAP2-202ENST00000378034 THEM6Q8WUY1 208 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ASB17Q8WXJ9 295 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF799Q96GE5 643 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 Q96MT0 163 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 OR2J1Q9GZK6 312 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 SP140LQ9H930 580 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
CKAP2-202ENST00000378034 DUSP13Q9UII6 198 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 GABRB1P18505 474 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 CDKN1AP38936 164 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 OPRL1P41146 370 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ATP5J2P56134 94 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 SHEQ5VZ18 495 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 DEGS2Q6QHC5 323 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 PRSS57Q6UWY2 283 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 RHOXF1Q8NHV9 184 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 UBE2FQ969M7 185 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 SYT3Q9BQG1 590 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 MS4A5Q9H3V2 200 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 NIPAL2Q9H841 368 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ADGRL4Q9HBW9 690 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 CLN6Q9NWW5 311 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 DNAJC27Q9NZQ0 273 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ITGB1BP2Q9UKP3 347 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 STARD10Q9Y365 291 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 RRP15Q9Y3B9 282 aaKnown RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 CSMD2Q7Z408 3487 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 H0YAE9 185 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 H0YJX3 145 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 M0R233 179 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ENTPD6O75354 484 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ERCC1P07992 297 aaPredicted RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 MRPL3P09001 348 aaKnown RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 H2BFMP0C1H6 154 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 SBK2P0C263 348 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 HSD11B1P28845 292 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 IL18R1Q13478 541 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 TESK1Q15569 626 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 ENTHD1Q8IYW4 607 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 PERPQ96FX8 193 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 VCX3BQ9H321 246 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 DYNLRB1Q9NP97 96 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 CGGBP1Q9UFW8 167 aaPredicted RBP11.36□□□□□ -0.59
CKAP2-202ENST00000378034 FZR1Q9UM11 496 aa11.36□□□□□ -0.59
CKAP2-202ENST00000378034 A0A1W2PPW3 197 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 MT-ND5P03915 603 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 LCATP04180 440 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 LIPAP38571 399 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 MTNR1AP48039 350 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 ADARB1P78563 741 aaKnown RBP11.35□□□□□ -0.59
CKAP2-202ENST00000378034 SPATA46Q5T0L3 261 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 FBXW12Q6X9E4 464 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 SLC35F2Q8IXU6 374 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 SETD9Q8NE22 299 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 OR51G2Q8NGK0 314 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 AMELYQ99218 206 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 RAB1BQ9H0U4 201 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 CYSLTR2Q9NS75 346 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 ARFGEF3Q5TH69 2177 aa11.35□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF254O75437 659 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 CLPTM1O96005 669 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 OR2T7P0C7T2 308 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 RAC2P15153 192 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 DCTDP32321 178 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ATP6V1E1P36543 226 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 SLC6A9P48067 706 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ROM1Q03395 351 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 MALLQ13021 153 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF691Q5VV52 312 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 SPATC1Q76KD6 591 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF283Q8N7M2 679 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 OR2T27Q8NH04 317 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 SNX33Q8WV41 574 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 CYGBQ8WWM9 190 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
CKAP2-202ENST00000378034 HAVCR1Q96D42 359 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ADI1Q9BV57 179 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 MROQ9BYG7 248 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 TAAR3PQ9P1P4 343 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 PCDHGB1Q9Y5G3 927 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 HSPE1-MOB4S4R3N1 261 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 MAST4O15021 2626 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 ADRA2AP08913 450 aa11.34□□□□□ -0.59
CKAP2-202ENST00000378034 KITLGP21583 273 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms