RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 C1orf100Q5SVJ3 147 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 RHOUQ7L0Q8 258 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 PPP1R32Q7Z5V6 425 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 OR4D6Q8NGJ1 314 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 OR6N1Q8NGY5 312 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ADAT3Q96EY9 351 aaPredicted RBP17.91■□□□□ 0.46
VSX1-202ENST00000376709 GLTPQ9NZD2 209 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 CNTRLQ7Z7A1 2325 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 NPIPA2E9PIF3 369 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 NPIPA3F8WFD2 350 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ICMTO60725 284 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 SLC2A1P11166 492 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ICAM2P13598 275 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 RAD52P43351 418 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 CSNK1A1P48729 337 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ACTBP60709 375 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ACTG1P63261 375 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 CSNK2A1P68400 391 aaPredicted RBP17.91■□□□□ 0.46
VSX1-202ENST00000376709 GALK2Q01415 458 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 RBMS2Q15434 407 aaKnown RBP17.91■□□□□ 0.46
VSX1-202ENST00000376709 OR10K2Q6IF99 312 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 C6orf15Q6UXA7 325 aaPredicted RBP17.91■□□□□ 0.46
VSX1-202ENST00000376709 ZNF813Q6ZN06 617 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 OR5D14Q8NGL3 314 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 OR1J2Q8NGS2 313 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 ZNF431Q8TF32 576 aaPredicted RBP17.91■□□□□ 0.46
VSX1-202ENST00000376709 LOXL4Q96JB6 756 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 SGCZQ96LD1 299 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 TMEM138Q9NPI0 162 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 MGAT4AQ9UM21 535 aa17.91■□□□□ 0.46
VSX1-202ENST00000376709 AKAIN1P0CW23 69 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ZNF17P17021 662 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ANXA7P20073 488 aaKnown RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 CAPZA1P52907 286 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 GLDNQ6ZMI3 551 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 Q6ZTK2 550 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 CREB3L2Q70SY1 520 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ABHD12BQ7Z5M8 362 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 OR1M1Q8NGA1 313 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 OR11H4Q8NGC9 324 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 OR4D10Q8NGI6 311 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 OR8S1Q8NH09 359 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 PIGQQ9BRB3 760 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 SEC22CQ9BRL7 303 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 NAA11Q9BSU3 229 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 STRADBQ9C0K7 418 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 CNTD2Q9H8S5 307 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 VAMP5O95183 116 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 P04436 131 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 CD59P13987 128 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ZNF20P17024 532 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ZNF121P58317 390 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 ZP1P60852 638 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 SSBP1Q04837 148 aaKnown RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 KCNMB1Q16558 191 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 SGCAQ16586 387 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 RAB11FIP2Q7L804 512 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 ARMC10Q8N2F6 343 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 OR52N4Q8NGI2 321 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 TMEM41AQ96HV5 264 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 UCN2Q96RP3 112 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 GINS4Q9BRT9 223 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 B3GNT4Q9C0J1 378 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 GPN1Q9HCN4 374 aaPredicted RBP17.9■□□□□ 0.46
VSX1-202ENST00000376709 ZNF69Q9UC07 566 aa17.9■□□□□ 0.46
VSX1-202ENST00000376709 CDX4O14627 284 aaPredicted RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 TNFSF11O14788 317 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 LDLRAD4O15165 306 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 WDPCPO95876 746 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 LPLP06858 475 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 RAB3AP20336 220 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 TIPARPQ7Z3E1 657 aaKnown RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 MEIOBQ8N635 442 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 OR13C9Q8NGT0 318 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 GPX8Q8TED1 209 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 CT55Q8WUE5 264 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 NKD1Q969G9 470 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 ZNF436Q9C0F3 470 aaPredicted RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 TTC28Q96AY4 2481 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 ANKRD34BA5PLL1 514 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 CREBL2O60519 120 aaPredicted RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 TSC22D2O75157 780 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 CD3DP04234 171 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 HTR2BP41595 481 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 CX3CR1P49238 355 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 RAC1P63000 192 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 B3GNTL1Q67FW5 361 aaPredicted RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 LYPD6Q86Y78 171 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 NAXDQ8IW45 347 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 SLC22A24Q8N4F4 322 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 PTX4Q96A99 478 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 NTNG2Q96CW9 530 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 ZNF385AQ96PM9 386 aaKnown RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 UTP23Q9BRU9 249 aaKnown RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 ZNF416Q9BWM5 594 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 PNRC2Q9NPJ4 139 aaKnown RBP17.89■□□□□ 0.45
VSX1-202ENST00000376709 PTTG3PQ9NZH4 202 aa17.89■□□□□ 0.45
VSX1-202ENST00000376709 A0A0A6YYH2 397 aa17.88■□□□□ 0.45
VSX1-202ENST00000376709 A6NJ64 397 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms