RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 TMEM71Q6P5X7 295 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 HMGB4Q8WW32 186 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 INTS12Q96CB8 462 aaKnown RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 JSRP1Q96MG2 331 aaPredicted RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 IKZF5Q9H5V7 419 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 ALKBH4Q9NXW9 302 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 PLAGL1Q9UM63 463 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 J3KTA2 159 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 K7ERU9 68 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 RPS18P62269 152 aaKnown RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 CISD2Q8N5K1 135 aaKnown RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 SDF2Q99470 211 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 PLEKHB1Q9UF11 243 aaPredicted RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 POLDIP2Q9Y2S7 368 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 NME2P22392 152 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 ABCD3P28288 659 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 FCGR2CP31995 323 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 CSF2RBP32927 897 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 SLC19A1P41440 591 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 PRSS54Q6PEW0 395 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 C5AR2Q9P296 337 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 H3BQ06 376 aaPredicted RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 AKR7A2O43488 359 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 ZNF28P17035 718 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 SIM1P81133 766 aaPredicted RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 RTP2Q5QGT7 225 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 LDLRAD1Q5T700 205 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 EIF4E3Q8N5X7 224 aaKnown RBP8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 RTP3Q9BQQ7 232 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 GNG13Q9P2W3 67 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 ZNF225Q9UK10 706 aa8.04□□□□□ -1.12
SHROOM4-202ENST00000376020 FBP1P09467 338 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 APLNRP35414 380 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CSNK1G2P78368 415 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 SSX1Q16384 188 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TMEM179BQ7Z7N9 219 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TNFRSF13CQ96RJ3 184 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 PIGQQ9BRB3 760 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 LAT2Q9GZY6 243 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 APOBEC3BQ9UH17 382 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 FLVCR1Q9Y5Y0 555 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 BRCA1P38398 1863 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 PLXNA3P51805 1871 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ADH4P08319 380 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CTSCP53634 463 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ATP6V1FQ16864 119 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 FAM209AQ5JX71 171 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 RAET1LQ5VY80 246 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 FCRLBQ6BAA4 426 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TOX2Q96NM4 488 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 FLVCR2Q9UPI3 526 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 B4DGG1 531 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 SMAD9O15198 467 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 GYPBP06028 91 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 SELEP16581 610 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CD22P20273 847 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 INPP5JQ15735 1006 aaPredicted RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 NCR3LG1Q68D85 454 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 HSD11B1LQ7Z5J1 315 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 OR52E1Q8NGJ3 308 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TMEM255BQ8WV15 326 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TMEM40Q8WWA1 233 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ARHGDIGQ99819 225 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CLDND1Q9NY35 253 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TCN2P20062 427 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 UBE2NP61088 152 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 HAGHQ16775 308 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 LHFPL2Q6ZUX7 228 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CDH20Q9HBT6 801 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CHST2Q9Y4C5 530 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CCDC187A0A096LP49 1063 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 K7ERQ8 282 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 SOCS6O14544 535 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CLEC2LP0C7M8 214 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 MORN1Q5T089 497 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 CST9LP1Q5W188 147 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 P4HA3Q7Z4N8 544 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ZNF768Q9H5H4 540 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 WSB1Q9Y6I7 421 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 PHF1O43189 567 aaPredicted RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 C1orf140Q5VVS0 124 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ZNF574Q6ZN55 896 aaPredicted RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 RBM24Q9BX46 236 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 RHBDD3Q9Y3P4 386 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TLCD2A6NGC4 264 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 ABLIM3O94929 683 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 PTBP3O95758 552 aaKnown RBP8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TNFRSF4P43489 277 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 RAB30Q15771 203 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 TMEM52BQ4KMG9 183 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 C2orf27AQ580R0 203 aa8.03□□□□□ -1.12
SHROOM4-202ENST00000376020 OR52R1Q8NGF1 315 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms