RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZNF136P52737 540 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 RAB4BP61018 213 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 EMC4Q5J8M3 183 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 AADACL3Q5VUY0 350 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SHEQ5VZ18 495 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 GRINAQ7Z429 371 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 RRNAD1Q96FB5 475 aaKnown RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 COX14Q96I36 57 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 PIGMQ9H3S5 423 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 B4GALT7Q9UBV7 327 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 B9D1Q9UPM9 204 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 BCAT2O15382 392 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TXNDC12O95881 172 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 QDPRP09417 244 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 COL9A1P20849 921 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CNR1P21554 472 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TAGLN2P37802 199 aaKnown RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 FUT5Q11128 374 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 KLF9Q13886 244 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF626Q68DY1 528 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CLEC9AQ6UXN8 241 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SLC25A21Q9BQT8 299 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CHRNA9Q9UGM1 479 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TBX21Q9UL17 535 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 HS3ST1O14792 307 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MGMTP16455 207 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MRPS21P82921 87 aaKnown RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 MANEAQ5SRI9 462 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF770Q6IQ21 691 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM229BQ8NBD8 167 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 AKR1E2Q96JD6 320 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF75AQ96N20 296 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 LRFN5Q96NI6 719 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SLC22A11Q9NSA0 550 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 KCNIP1Q9NZI2 227 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CTSFQ9UBX1 484 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ACAD8Q9UKU7 415 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 PADI1Q9ULC6 663 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 A0A087WUJ7 227 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 METTL12A8MUP2 240 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 ZFAND5O76080 213 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 CD53P19397 219 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SLC35A1P78382 337 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 GVQW1Q8N7I0 195 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NECAP1Q8NC96 275 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 C12orf57Q99622 126 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 RPP25Q9BUL9 199 aaKnown RBP5.91□□□□□ -1.46
SMC1A-202ENST00000375340 SPACA1Q9HBV2 294 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 KLHDC2Q9Y2U9 406 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 NEUROG3Q9Y4Z2 214 aa5.91□□□□□ -1.46
SMC1A-202ENST00000375340 A0A1B0GX78 115 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FRG2CA6NGY1 282 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ANKRD30BLA7E2S9 258 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HNF1AP20823 631 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 RPL23AP62750 156 aaKnown RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FAM53BQ14153 422 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 AADACL4Q5VUY2 407 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OR2W3Q7Z3T1 314 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 VN1R4Q7Z5H5 301 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SPRED2Q7Z698 418 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 STT3BQ8TCJ2 826 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FRZBQ92765 325 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 CCDC74AQ96AQ1 378 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SLC25A31Q9H0C2 315 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM184BQ9Y519 407 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HS3ST3A1Q9Y663 406 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 UMAD1C9J7I0 102 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OR3A4PP47883 348 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 AGFG1P52594 562 aaKnown RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 C17orf67Q0P5P2 114 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM196Q5HYL7 178 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF684Q5T5D7 378 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HIST2H3PS2Q5TEC6 136 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM65Q6PI78 240 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FBXO46Q6PJ61 603 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ADGRG3Q86Y34 549 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ARIH2OSQ8N7S6 290 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FAM71CQ8NEG0 241 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 GPR137Q96N19 417 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SIGLEC11Q96RL6 698 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SDHCQ99643 169 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ZCCHC4Q9H5U6 513 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 CALHM2Q9HA72 323 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ASH2LQ9UBL3 628 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TRAPPC2LH3BP13 241 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ALOX12BO75342 701 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 OR7C1O76099 320 aaPredicted RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 HPXP02790 462 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FCGR2CP31995 323 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 CAPZBP47756 277 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 DCDP81605 110 aaKnown RBP5.9□□□□□ -1.46
SMC1A-202ENST00000375340 FOXF1Q12946 379 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 ELFN2Q5R3F8 820 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM81Q6P7N7 255 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 SLC16A14Q7RTX9 510 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 WDSUB1Q8N9V3 476 aa5.9□□□□□ -1.46
SMC1A-202ENST00000375340 LRRC61Q9BV99 259 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms