RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CEBPEQ15744 281 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 UBE2V2Q15819 145 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NPSR1Q6W5P4 371 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 ATG101Q9BSB4 218 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 SLC35B3Q9H1N7 401 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 PRDM7Q9NQW5 492 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF346Q9UL40 294 aaKnown RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 SLC7A9P82251 487 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 MOGAT2Q3SYC2 334 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 PLPP7Q8NBV4 271 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 TSEN15Q8WW01 171 aaKnown RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 STACQ99469 402 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 RAB18Q9NP72 206 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 FLRT3Q9NZU0 649 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 IKZF2Q9UKS7 526 aa11.6□□□□□ -0.55
PRPF4-201ENST00000374198 PRRC2BQ5JSZ5 2229 aaKnown RBP11.6□□□□□ -0.55
PRPF4-201ENST00000374198 A0A087WUJ7 227 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 A0A1B0GWA3 101 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 C5orf67F2Z3F1 127 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 LINC00271P0C7V0 271 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 HTR2CP28335 458 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 RAB32Q13637 225 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PHF19Q5T6S3 580 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 DPY19L2P2Q6ZN68 376 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF547Q8IVP9 402 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PRSS35Q8N3Z0 413 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 RASD2Q96D21 266 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 GNRHR2Q96P88 292 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PCBD2Q9H0N5 130 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PRODH2Q9UF12 536 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PHOX2AO14813 284 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 GRM6O15303 877 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 NME2P1O60361 137 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 LEFTY1O75610 366 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 CCKBRP32239 447 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
PRPF4-201ENST00000374198 TAS2R31P59538 309 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 M1APQ8TC57 530 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 RSPRY1Q96DX4 576 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
PRPF4-201ENST00000374198 WDR92Q96MX6 357 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF558Q96NG5 402 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 SRMSQ9H3Y6 488 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 FBXO34Q9NWN3 711 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 SLC25A13Q9UJS0 675 aa11.59□□□□□ -0.55
PRPF4-201ENST00000374198 A0A0A6YYH2 397 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 A0A1W2PPV9 198 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 A6NJ64 397 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 RAB27BO00194 218 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 EREGO14944 169 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 ZNF354AO60765 605 aaPredicted RBP11.58□□□□□ -0.56
PRPF4-201ENST00000374198 CXCL1P09341 107 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 PET100P0DJ07 73 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 IGFALSP35858 605 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 FAM3AP98173 230 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 ACY1Q03154 408 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 DMWDQ09019 674 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 RASGEF1BQ0VAM2 473 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 ABHD17CQ6PCB6 329 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 COL26A1Q96A83 441 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 LMLNQ96KR4 655 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 CRLF2Q9HC73 371 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 SIRT7Q9NRC8 400 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 PUS1Q9Y606 427 aaKnown RBP eCLIP11.58□□□□□ -0.56
PRPF4-201ENST00000374198 CDH23Q9H251 3354 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 LDB3O75112 727 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 JTBO76095 146 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 ELFN1P0C7U0 828 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 OR13C7P0DN81 318 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 OR1D2P34982 312 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 HRH1P35367 487 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 TSFMP43897 325 aaKnown RBP11.58□□□□□ -0.56
PRPF4-201ENST00000374198 PLAURQ03405 335 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 GLYATL3Q5SZD4 288 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 MDGA2Q7Z553 956 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 C5orf24Q7Z6I8 188 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 TRAPPC6BQ86SZ2 158 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 GVQW1Q8N7I0 195 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 RCBTB1Q8NDN9 531 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 MARCH1Q8TCQ1 289 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 Q8WTZ3 238 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 PTCHD1Q96NR3 888 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 FAM212BQ9NTI7 297 aaPredicted RBP11.58□□□□□ -0.56
PRPF4-201ENST00000374198 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.58□□□□□ -0.56
PRPF4-201ENST00000374198 NUP210LQ5VU65 1888 aa11.58□□□□□ -0.56
PRPF4-201ENST00000374198 CXorf51AA0A1B0GTR3 108 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 ARPC3O15145 178 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 CYTIPO60759 359 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 GAPDHP04406 335 aaKnown RBP11.57□□□□□ -0.56
PRPF4-201ENST00000374198 HEXBP07686 556 aa11.57□□□□□ -0.56
PRPF4-201ENST00000374198 S1PR1P21453 382 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms