RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
CDKN1A-202ENST00000373711 ZNF229Q9UJW7 825 aa12.43□□□□□ -0.42
CDKN1A-202ENST00000373711 FMO6PO60774 539 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 WNT2P09544 360 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 ZNF32P17041 273 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 HOXB6P17509 224 aaKnown RBP12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 FASP25445 335 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 RRM2P31350 389 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 DAP3P51398 398 aaKnown RBP12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 RELBQ01201 579 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 ATP6AP1Q15904 470 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 HIST3H3Q16695 136 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 C10orf128Q5T292 105 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 OR2T5Q6IEZ7 315 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 TTC33Q6PID6 262 aaPredicted RBP12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 BRD3OSQ6XYD6 125 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 NANOGNBQ7Z5D8 188 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 TMEM179BQ7Z7N9 219 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 PQLC1Q8N2U9 271 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 OR8B3Q8NGG8 313 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 OR2T29Q8NH02 315 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 ADAMTS16Q8TE57 1224 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 NEIL1Q96FI4 390 aaPredicted RBP12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 PRRC1Q96M27 445 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 OR8B2Q96RD0 313 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 ZNF347Q96SE7 839 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 CHIAQ9BZP6 476 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 TAS2R5Q9NYW4 299 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 DNAJB9Q9UBS3 223 aa12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
CDKN1A-202ENST00000373711 KIR2DS1A0A191URI9 304 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 CH25HO95992 272 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 TAS2R41P59536 307 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 PCBD1P61457 104 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 SPIBQ01892 262 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 PAX2Q02962 417 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 CYP4Z1Q86W10 505 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 KLBQ86Z14 1044 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 FAM110DQ8TAY7 271 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 DHRS1Q96LJ7 313 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 C4orf45Q96LM5 186 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 PRSS27Q9BQR3 290 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 NMNAT1Q9HAN9 279 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 RNPEPL1Q9HAU8 725 aa12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 NDRG4Q9ULP0 352 aaKnown RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
CDKN1A-202ENST00000373711 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 TRAPPC13A5PLN9 417 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 GNGT2O14610 69 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 OR5F1O95221 314 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 GADD45GO95257 159 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 TSPAN15O95858 294 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 ABHD16AO95870 558 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 MELTFP08582 738 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 FCGR1AP12314 374 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 ZNF133P52736 654 aaPredicted RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 HMGA2P52926 109 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 SPRNQ5BIV9 151 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 SLC27A4Q6P1M0 643 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 OFCC1Q8IZS5 231 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 OR4C15Q8NGM1 316 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 OR52J3Q8NH60 311 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 AKR7LQ8NHP1 331 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 CENPNQ96H22 339 aaPredicted RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 COG8Q96MW5 612 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 FUZQ9BT04 418 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 FNDC11Q9BVV2 318 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 POLR2J2Q9GZM3 115 aaKnown RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 POLR2J3Q9H1A7 115 aaKnown RBP12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 SLC7A7Q9UM01 511 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 LYVE1Q9Y5Y7 322 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 U3KQV3 271 aa12.4□□□□□ -0.42
CDKN1A-202ENST00000373711 TRBV4-1A0A0J9YWV2 114 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 LRRC30A6NM36 301 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 H1F0P07305 194 aaKnown RBP12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 CSF1P09603 554 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 ACADSP16219 412 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 MMP16P51512 607 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 PROK1P58294 105 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 ERVK-25P63136 954 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 PSG4Q00888 419 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
CDKN1A-202ENST00000373711 PSG7Q13046 419 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms