RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 DYSFO75923 2080 aa18.32■□□□□ 0.52
CCDC28B-201ENST00000373602 A0A0G2JMP0 313 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 A0A0X1KG70 313 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 AVPP01185 164 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 HLA-DQA2P01906 255 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 T-ENOLP0DO92 83 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 ZNF362Q5T0B9 420 aaPredicted RBP18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 TEX29Q8N6K0 151 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 CCDC197Q8NCU1 140 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 OR4M2Q8NGB6 313 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 OR8D4Q8NGM9 314 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 OR13G1Q8NGZ3 307 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 SIGLEC11Q96RL6 698 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 ATF6BQ99941 703 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 C1QTNF5Q9BXJ0 243 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 TMPRSS13Q9BYE2 586 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 UBAP1Q9NZ09 502 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 KCNG2Q9UJ96 466 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 PPP1R3CQ9UQK1 317 aa18.31■□□□□ 0.52
CCDC28B-201ENST00000373602 J3QLI3 93 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 SBK2P0C263 348 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 ACSM4P0C7M7 580 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 RBMXP38159 391 aaKnown RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 PPP1R8Q12972 351 aaKnown RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 SLC27A4Q6P1M0 643 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 ATG16L2Q8NAA4 619 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 CYB561A3Q8NBI2 242 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 POP5Q969H6 163 aaKnown RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 ZNF582Q96NG8 517 aaPredicted RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 VNN3Q9NY84 501 aa18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 PRPF19Q9UMS4 504 aaKnown RBP18.3■□□□□ 0.52
CCDC28B-201ENST00000373602 IQCF6A8MYZ5 107 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 F5H5K5 113 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 ZNF823P16415 610 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 GATA3P23771 443 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 PYCR1P32322 319 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 TRAP1Q12931 704 aaKnown RBP18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 SCGB2A2Q13296 93 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 TMEM155Q4W5P6 130 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 FAM98BQ52LJ0 330 aaKnown RBP18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 OR2T5Q6IEZ7 315 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 LRRC28Q86X40 367 aaPredicted RBP18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 LNX2Q8N448 690 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 SPICQ8N5J4 248 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 AQP11Q8NBQ7 271 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 OR2T4Q8NH00 348 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 OR2T29Q8NH02 315 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 ST7LQ8TDW4 575 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 ZNRF4Q8WWF5 429 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 MAP6Q96JE9 813 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 SLC30A2Q9BRI3 323 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 DGCR6LQ9BY27 220 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 OCEL1Q9H607 264 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 REEP1Q9H902 201 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 GCM1Q9NP62 436 aa18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 SAMHD1Q9Y3Z3 626 aaKnown RBP18.29■□□□□ 0.52
CCDC28B-201ENST00000373602 LOC105371242A0A075B767 164 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 A0A0A6YYJ9 748 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 BTG1P62324 171 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 MICAQ29983 383 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 DCAF12L2Q5VW00 463 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 SLC37A3Q8NCC5 494 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 PROKR2Q8NFJ6 384 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 OR10AD1Q8NGE0 317 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 MEGF10Q96KG7 1140 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 TSSK6Q9BXA6 273 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 HCAR1Q9BXC0 346 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 WDR76Q9H967 626 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 PATZ1Q9HBE1 687 aaKnown RBP18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 TBC1D23Q9NUY8 699 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 PCDHB10Q9UN67 800 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 BAIAP2Q9UQB8 552 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 U3KQV3 271 aa18.28■□□□□ 0.52
CCDC28B-201ENST00000373602 WNK2Q9Y3S1 2297 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 A0A1B0GWJ7 208 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 H0YL77 283 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 TMEM178BH3BS89 294 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 IFNL4K9M1U5 179 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 MLNRO43193 412 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 FOXH1O75593 365 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 SELEP16581 610 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 MMP16P51512 607 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 TPTEP56180 551 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 LCN2P80188 198 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 GK2Q14410 553 aaPredicted RBP18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 ZMYND11Q15326 602 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 C1QL2Q7Z5L3 287 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 NAA40Q86UY6 237 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 KLHL36Q8N4N3 616 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 OR10S1Q8NGN2 331 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 ASB9Q96DX5 294 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 RBM4Q9BWF3 364 aaKnown RBP18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 C1orf21Q9H246 121 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 TAS2R1Q9NYW7 299 aa18.27■□□□□ 0.52
CCDC28B-201ENST00000373602 PPIAL4EA0A075B759 164 aa18.26■□□□□ 0.51
CCDC28B-201ENST00000373602 PPIAL4CA0A0B4J2A2 164 aa18.26■□□□□ 0.51
CCDC28B-201ENST00000373602 TVP23AA6NH52 213 aa18.26■□□□□ 0.51
CCDC28B-201ENST00000373602 PPIAL4DF5H284 164 aa18.26■□□□□ 0.51
CCDC28B-201ENST00000373602 LCATP04180 440 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms