RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 SMIM3Q9BZL3 60 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 BANF2Q9H503 90 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 TMEM184BQ9Y519 407 aaPredicted RBP15.9■□□□□ 0.14
VPS26A-202ENST00000373382 PRUNE2Q8WUY3 3088 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 SPAG17Q6Q759 2223 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 A6NCN8 305 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 METTL12A8MUP2 240 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 EFSO43281 561 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 S100A6P06703 90 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 IL12BP29460 328 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 OR1D4P47884 311 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 NR0B1P51843 470 aaKnown RBP15.9■□□□□ 0.14
VPS26A-202ENST00000373382 SGCAQ16586 387 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 AWAT2Q6E213 333 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 FAM166AQ6J272 317 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 MAMDC2Q7Z304 686 aaPredicted RBP15.9■□□□□ 0.14
VPS26A-202ENST00000373382 OR4K15Q8NH41 348 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 SFT2D1Q8WV19 159 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 MRGPRFQ96AM1 343 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 SCARF2Q96GP6 870 aaPredicted RBP15.9■□□□□ 0.14
VPS26A-202ENST00000373382 NICN1Q9BSH3 213 aa15.9■□□□□ 0.14
VPS26A-202ENST00000373382 DHCR7Q9UBM7 475 aaKnown RBP15.9■□□□□ 0.14
VPS26A-202ENST00000373382 SLC2A1P11166 492 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 CD80P33681 288 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 RPL27P61353 136 aaKnown RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 SSBP1Q04837 148 aaKnown RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 PEA15Q15121 130 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 TGIF1Q15583 401 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 RNF144BQ7Z419 303 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 OR51F2Q8NH61 342 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 SLCO5A1Q9H2Y9 848 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 SLC17A5Q9NRA2 495 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 OR5AC2Q9NZP5 309 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 KCNK7Q9Y2U2 307 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 WIPF3A6NGB9 483 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 H0YIG0 161 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 RAB27BO00194 218 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 SDCBPO00560 298 aaPredicted RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 MPIG6BO95866 241 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 HNRNPA2B1P22626 353 aaKnown RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 EMC4Q5J8M3 183 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 ASB17Q8WXJ9 295 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 TSLPQ969D9 159 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 RHOFQ9HBH0 211 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 ACKR4Q9NPB9 350 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 PRODH2Q9UF12 536 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 A0A1B0GV50 99 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 H0YIZ8 118 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 MED6O75586 246 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 TXNDC12O95881 172 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 APOC1P02654 83 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 H2BFMP0C1H6 154 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 MUC1P15941 1255 aaPredicted RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 IL11P20809 199 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 GLO1Q04760 184 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 ZNF528Q3MIS6 628 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 PTCRAQ6ISU1 281 aaPredicted RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 RBMS3Q6XE24 437 aaKnown RBP15.89■□□□□ 0.13
VPS26A-202ENST00000373382 GLYATL2Q8WU03 294 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 ASB13Q8WXK3 278 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 C14orf79Q96F83 325 aa15.89■□□□□ 0.13
VPS26A-202ENST00000373382 SPTBN5Q9NRC6 3674 aaKnown RBP15.88■□□□□ 0.13
VPS26A-202ENST00000373382 OPN1LWP04000 364 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 CATSPERDQ86XM0 798 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 ANGPTL5Q86XS5 388 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 ZNF615Q8N8J6 731 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 C19orf47Q8N9M1 422 aaKnown RBP15.88■□□□□ 0.13
VPS26A-202ENST00000373382 OR52N5Q8NH56 324 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 C20orf24Q9BUV8 137 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 FOXQ1Q9C009 403 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 COA4Q9NYJ1 87 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 LRP3O75074 770 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 EIF3GO75821 320 aaKnown RBP eCLIP15.88■□□□□ 0.13
VPS26A-202ENST00000373382 CD74P04233 296 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 GP1BBP13224 206 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 RCC1P18754 421 aaPredicted RBP15.88■□□□□ 0.13
VPS26A-202ENST00000373382 PTGFRP43088 359 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 EMC6Q9BV81 110 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 EDEM2Q9BV94 578 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 PCOLCE2Q9UKZ9 415 aa15.88■□□□□ 0.13
VPS26A-202ENST00000373382 KNG1P01042 644 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 EMP2P54851 167 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 SMCO1Q147U7 214 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 ZNF260Q3ZCT1 412 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 FAM76BQ5HYJ3 339 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 HLA-DQA1Q5Y7H0 255 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 THRSPQ92748 146 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 NUDT22Q9BRQ3 303 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 UQCC2Q9BRT2 126 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 ST6GALNAC5Q9BVH7 336 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 MED29Q9NX70 200 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 PCNX3Q9H6A9 2034 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 MEGF11A6BM72 1044 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 PPICP45877 212 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 PPT1P50897 306 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 TDGQ13569 410 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 ARFRP1Q13795 201 aa15.87■□□□□ 0.13
VPS26A-202ENST00000373382 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.87■□□□□ 0.13
VPS26A-202ENST00000373382 HOXB13Q92826 284 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms