RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 HYLS1Q96M11 299 aa11.78□□□□□ -0.52
NCDN-203ENST00000373253 ZNF385AQ96PM9 386 aaKnown RBP11.78□□□□□ -0.52
NCDN-203ENST00000373253 DHRS9Q9BPW9 319 aa11.78□□□□□ -0.52
NCDN-203ENST00000373253 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
NCDN-203ENST00000373253 ACKR4Q9NPB9 350 aa11.78□□□□□ -0.52
NCDN-203ENST00000373253 KCNN3Q9UGI6 736 aa11.78□□□□□ -0.52
NCDN-203ENST00000373253 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.52
NCDN-203ENST00000373253 ANKUB1A6NFN9 424 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 ATP6V1G2-DDX39BF2Z307 99 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 GPR171O14626 319 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 POU3F2P20265 443 aaPredicted RBP11.77□□□□□ -0.53
NCDN-203ENST00000373253 SLC6A1P30531 599 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 TRAPPC6BQ86SZ2 158 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 TMEM17Q86X19 198 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.53
NCDN-203ENST00000373253 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 ASB17Q8WXJ9 295 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 CIB4A0PJX0 185 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
NCDN-203ENST00000373253 CD79AP11912 226 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 EDN3P14138 238 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 BDKRB2P30411 391 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 MPLP40238 635 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 CX3CR1P49238 355 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 SLC25A1P53007 311 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 SHBQ15464 509 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 LINC00114Q6XXX2 140 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 TOMM40LQ969M1 308 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 C1QTNF6Q9BXI9 259 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 STRADBQ9C0K7 418 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 C12orf49Q9H741 205 aa11.77□□□□□ -0.53
NCDN-203ENST00000373253 OR2M5A3KFT3 312 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 ZNF814B7Z6K7 855 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 MS4A18H0YCH9 400 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 STMND1H3BQB6 276 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 RGS11O94810 467 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 ZNF432O94892 652 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 ZNF35P13682 527 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SORDQ00796 357 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 ACSM1Q08AH1 577 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 MS4A18Q3C1V0 323 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 C20orf196Q8IYI0 205 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 ST8SIA1Q92185 356 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 OR2S2Q9NQN1 319 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SCP2D1Q9UJQ7 156 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 FOXJ3Q9UPW0 622 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 RAB40ALP0C0E4 278 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 FCGR2AP12318 317 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 GZMKP49863 264 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SELENOPP49908 381 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 CARD18P57730 90 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 FXYD4P59646 89 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 KMT5CQ86Y97 462 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 RAB40AQ8WXH6 277 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 MARVELD1Q9BSK0 173 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 CHST6Q9GZX3 395 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 SLC23A1Q9UHI7 598 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 LOC100289279A0A1B0GTE1 492 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 MEX3AA1L020 520 aaKnown RBP11.76□□□□□ -0.53
NCDN-203ENST00000373253 J3QRE1 110 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 GALNSP34059 522 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 MCHR2Q969V1 340 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 BCL2L14Q9BZR8 327 aa11.76□□□□□ -0.53
NCDN-203ENST00000373253 HLA-DQB1P01920 261 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 ZNF84P51523 738 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 RPS4XP62701 263 aaKnown RBP11.75□□□□□ -0.53
NCDN-203ENST00000373253 IL10RAQ13651 578 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 AAED1Q7RTV5 226 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 PIGCQ92535 297 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 RADILQ96JH8 1075 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
NCDN-203ENST00000373253 GPR173Q9NS66 373 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 LRFN1Q9P244 771 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
NCDN-203ENST00000373253 PILRBQ9UKJ0 227 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 HLA-AP01891 365 aaKnown RBP11.75□□□□□ -0.53
NCDN-203ENST00000373253 SFTPBP07988 381 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 AKAIN1P0CW23 69 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 S100A10P60903 97 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 EGR3Q06889 387 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 TGIF1Q15583 401 aa11.75□□□□□ -0.53
NCDN-203ENST00000373253 MOGAT2Q3SYC2 334 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms