RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MAGEB1P43366 347 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 AGFG1P52594 562 aaKnown RBP12.48□□□□□ -0.41
LDB3-204ENST00000372066 MLF1P58340 268 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 FMODQ06828 376 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 MFGE8Q08431 387 aaPredicted RBP12.48□□□□□ -0.41
LDB3-204ENST00000372066 RAB11BQ15907 218 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 ELFN2Q5R3F8 820 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.48□□□□□ -0.41
LDB3-204ENST00000372066 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
LDB3-204ENST00000372066 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 OR10AC1Q8NH08 325 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 SCMH1Q96GD3 660 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 TMEM41AQ96HV5 264 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 CACNG6Q9BXT2 260 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 C1orf198Q9H425 327 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 OR52A1Q9UKL2 312 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 SLC22A13Q9Y226 551 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 SLC5A6Q9Y289 635 aa12.48□□□□□ -0.41
LDB3-204ENST00000372066 WIPF3A6NGB9 483 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 SHISA8B8ZZ34 492 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 RGS13O14921 159 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 CLDN1O95832 211 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 PTH2RP49190 550 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 MRPS15P82914 257 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 SSBP1Q04837 148 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 SNTB2Q13425 540 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 OLFML2AQ68BL7 652 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 TMEM225Q6GV28 225 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 DNM1P46Q6ZS02 220 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 ESPNLQ6ZVH7 1005 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 NOXA1Q86UR1 476 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 GLCCI1Q86VQ1 547 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 OR56B4Q8NH76 319 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 C11orf40Q8WZ69 217 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 DIABLOQ9NR28 239 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 HPF1Q9NWY4 346 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 SULT2B1O00204 365 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 XRCC3O43542 346 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 DNPH1O43598 174 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 PRAF2O60831 178 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 VAMP5O95183 116 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 MPZL1O95297 269 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 HPP00738 406 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 ZNF43P17038 809 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 ERP29P30040 261 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 SRP9P49458 86 aaKnown RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 CLDN12P56749 244 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 TAS2R20P59543 309 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 MAB21L1Q13394 359 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 POU4F3Q15319 338 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 BCL2L15Q5TBC7 163 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 FAM166AQ6J272 317 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 TMPPEQ6ZT21 453 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 PPP1R32Q7Z5V6 425 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 TMEM156Q8N614 296 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 CDCP1Q9H5V8 836 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 AUNIPQ9H7T9 357 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 RANGRFQ9HD47 186 aaPredicted RBP12.47□□□□□ -0.41
LDB3-204ENST00000372066 G6PC2Q9NQR9 355 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 EMC9Q9Y3B6 208 aa12.47□□□□□ -0.41
LDB3-204ENST00000372066 A0A0A6YYH2 397 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 TMEM269A0A1B0GVZ9 245 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 LOC107986453A0A1B0GWG9 222 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 A6NJ64 397 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 GJE1A6NN92 205 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 ZNF878C9JN71 531 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 C1QBP02746 253 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 CDK2P24941 298 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 ITGA3P26006 1051 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 FAUP35544 74 aaKnown RBP12.46□□□□□ -0.42
LDB3-204ENST00000372066 DNASE1L1P49184 302 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms