RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 FAM71E2Q8N5Q1 922 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 TCTEX1D2Q8WW35 142 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 MMP25Q9NPA2 562 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 GPATCH2Q9NW75 528 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 FAM96BQ9Y3D0 163 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 IGHV5-10-1A0A0J9YXX1 117 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 TCRBV5S2A0A599 114 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 IGHV4-34P06331 123 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 CSF3P09919 207 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 CTXN2P0C2S0 81 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 SRD5A2P31213 254 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 HAAOP46952 286 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 AQP6Q13520 282 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 FBXL14Q8N1E6 418 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 SMAP2Q8WU79 429 aaPredicted RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 ARHGDIGQ99819 225 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 SARGQ9BW04 601 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 A0A0B4J2E0 115 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 A0A1B0GX12 115 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 PCP4L1A6NKN8 68 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 SULT1B1O43704 296 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 NPY4RP50391 375 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 RAB11AP62491 216 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 RIMKLAQ8IXN7 391 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 CISD2Q8N5K1 135 aaKnown RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 MBOAT4Q96T53 435 aa13.29□□□□□ -0.28
NDC1-201ENST00000371429 ZNF768Q9H5H4 540 aaKnown RBP13.29□□□□□ -0.28
NDC1-201ENST00000371429 HSPB2A8KAH6 182 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 HSD17B6O14756 317 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 GABARAPO95166 117 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 ZNF121P58317 390 aaPredicted RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 RAP2BP61225 183 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 BLOC1S1P78537 153 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 DOC2BQ14184 412 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 HSPB2Q16082 182 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SLC25A26Q70HW3 274 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 OR10X1Q8NGY0 326 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 OR51H1Q8NH63 302 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 RIMS4Q9H426 269 aaPredicted RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■■■■ 28.6
NDC1-201ENST00000371429 LRP5LA4QPB2 252 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 EML2O95834 649 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 CNR1P21554 472 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 ALDH3B2P48448 385 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 TAS2R30P59541 319 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 RAC1P63000 192 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 OR10D3Q8NH80 312 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SEC22AQ96IW7 307 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SLC6A13Q9NSD5 602 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 A0A1W2PS29 197 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 LY75O60449 1722 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 ECI1P42126 302 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 ZNF83P51522 516 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SOX8P57073 446 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 HBG1P69891 147 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 HBG2P69892 147 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SLC35G3Q8N808 338 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 TNFRSF1AP19438 455 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 POU3F3P20264 500 aaPredicted RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 LUMP51884 338 aaPredicted RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 EBPQ15125 230 aaKnown RBP13.28□□□□□ -0.28
NDC1-201ENST00000371429 ZIC1Q15915 447 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 BEX5Q5H9J7 111 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SLAMF9Q96A28 289 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 NRTNQ99748 197 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 CHST2Q9Y4C5 530 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 SCN4AP35499 1836 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 BRWD3Q6RI45 1802 aa13.28□□□□□ -0.28
NDC1-201ENST00000371429 RAB27BO00194 218 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 SORDQ00796 357 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 TAF9Q16594 264 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 MDGA2Q7Z553 956 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 SIAH3Q8IW03 269 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 NUBPLQ8TB37 319 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 M1APQ8TC57 530 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.28
NDC1-201ENST00000371429 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 SVILO95425 2214 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 IMPA2O14732 288 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 CD82P27701 267 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 GPNMBQ14956 572 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 ATPAF1Q5TC12 328 aaPredicted RBP13.27□□□□□ -0.28
NDC1-201ENST00000371429 TMPRSS7Q7RTY8 843 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 HAS2Q92819 552 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 CDCA4Q9BXL8 241 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 RBFOX1Q9NWB1 397 aaKnown RBP13.27□□□□□ -0.28
NDC1-201ENST00000371429 SLCO1C1Q9NYB5 712 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 PCOLCE2Q9UKZ9 415 aa13.27□□□□□ -0.28
NDC1-201ENST00000371429 ZNF816-ZNF321PA0A0X1KG74 233 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms