RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 AQP7P3A6NL99 342 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 TDGF1P13385 188 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 SLC35A1P78382 337 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 ZNF239Q16600 458 aaKnown RBP25.68■■□□□ 1.7
SSBP3-204ENST00000371320 OPN5Q6U736 354 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 OR5D14Q8NGL3 314 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 NKD1Q969G9 470 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 ZNF700Q9H0M5 742 aa25.68■■□□□ 1.7
SSBP3-204ENST00000371320 PATE3B3GLJ2 98 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 MPC2O95563 127 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 PDGFBP01127 241 aaPredicted RBP25.67■■□□□ 1.7
SSBP3-204ENST00000371320 QDPRP09417 244 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 CCL4P13236 92 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 KLK2P20151 261 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 GABREP78334 506 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 EXT1Q16394 746 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 ACBD4Q8NC06 268 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 IMMP1LQ96LU5 166 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 C9J4A7 227 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 CYB5AP00167 134 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 FAM109AQ8N4B1 249 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 SLC22A24Q8N4F4 322 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 OR51E1Q8TCB6 317 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 MOB1AQ9H8S9 216 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 ASH2LQ9UBL3 628 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 UPB1Q9UBR1 384 aa25.67■■□□□ 1.7
SSBP3-204ENST00000371320 A0A087WZY1 265 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 NTN3O00634 580 aaPredicted RBP25.66■■□□□ 1.7
SSBP3-204ENST00000371320 IFNA7P01567 189 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 COX6A1P12074 109 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 OR3A3P47888 321 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 RAB12Q6IQ22 244 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 TMPPEQ6ZT21 453 aa25.66■■□□□ 1.7
SSBP3-204ENST00000371320 LOC102725191A0A1B0GVB3 256 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 M0QYG6 137 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 RAB3AP20336 220 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 DUSP3P51452 185 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 PRKXP51817 358 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 DHODHQ02127 395 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 TRA2AQ13595 282 aaKnown RBP eCLIP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 HIST3H3Q16695 136 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 RHOUQ7L0Q8 258 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 MUC20Q8N307 709 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 GTPBP8Q8N3Z3 284 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 UXS1Q8NBZ7 420 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 UQCC2Q9BRT2 126 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 CDCP1Q9H5V8 836 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 A0A1B0GTI1 187 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 TMEM235A6NFC5 223 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 KLF7O75840 302 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 ITGB2P05107 769 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 GRK1Q15835 563 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 IDO2Q6ZQW0 420 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 CHMP1BQ7LBR1 199 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 CDH26Q8IXH8 852 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 GALNT16Q8N428 558 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 OR13C9Q8NGT0 318 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 WDR89Q96FK6 387 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-204ENST00000371320 CHST6Q9GZX3 395 aa25.65■■□□□ 1.7
SSBP3-204ENST00000371320 TLX3O43711 291 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-204ENST00000371320 MELTFP08582 738 aa25.64■■□□□ 1.7
SSBP3-204ENST00000371320 ZNF20P17024 532 aa25.64■■□□□ 1.7
SSBP3-204ENST00000371320 C4orf46Q504U0 113 aa25.64■■□□□ 1.7
SSBP3-204ENST00000371320 TINAGL1Q9GZM7 467 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-204ENST00000371320 ZNF107Q9UII5 783 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-204ENST00000371320 HS3ST3B1Q9Y662 390 aa25.64■■□□□ 1.7
SSBP3-204ENST00000371320 TEX51A0A1B0GUA7 166 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 PLSCR5A0PG75 271 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 ZNF736B4DX44 427 aaPredicted RBP25.64■■□□□ 1.69
SSBP3-204ENST00000371320 M0R233 179 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 BPNT1O95861 308 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 AMY2AP04746 511 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 C4BPBP20851 252 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 ZFP36L1Q07352 338 aaKnown RBP25.64■■□□□ 1.69
SSBP3-204ENST00000371320 EXOSC2Q13868 293 aaKnown RBP25.64■■□□□ 1.69
SSBP3-204ENST00000371320 COMMD2Q86X83 199 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 PAQR4Q8N4S7 273 aaPredicted RBP25.64■■□□□ 1.69
SSBP3-204ENST00000371320 OR2AK2Q8NG84 335 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 M1APQ8TC57 530 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 TNFAIP8L1Q8WVP5 186 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 FAM46BQ96A09 425 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 KLK13Q9UKR3 277 aa25.64■■□□□ 1.69
SSBP3-204ENST00000371320 C19orf67A6NJJ6 358 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 RER1O15258 196 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 LAMTOR5O43504 91 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 CLDN17P56750 224 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 UBE2MP61081 183 aaKnown RBP25.63■■□□□ 1.69
SSBP3-204ENST00000371320 KCNMB1Q16558 191 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 ZNF529Q6P280 563 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 TMEM81Q6P7N7 255 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 AQP3Q92482 292 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 SLC25A21Q9BQT8 299 aaPredicted RBP25.63■■□□□ 1.69
SSBP3-204ENST00000371320 ANGPTL4Q9BY76 406 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 ALX4Q9H161 411 aaPredicted RBP25.63■■□□□ 1.69
SSBP3-204ENST00000371320 POFUT1Q9H488 388 aa25.63■■□□□ 1.69
SSBP3-204ENST00000371320 SIX6O95475 246 aa25.62■■□□□ 1.69
SSBP3-204ENST00000371320 PMS2P2O95744 297 aa25.62■■□□□ 1.69
SSBP3-204ENST00000371320 CCL3P10147 92 aa25.62■■□□□ 1.69
SSBP3-204ENST00000371320 SLC2A1P11166 492 aa25.62■■□□□ 1.69
SSBP3-204ENST00000371320 SSR4P51571 173 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms