RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CTRB1P17538 263 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 UBE2IP63279 158 aaKnown RBP20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 CTRB2Q6GPI1 263 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 FAM122BQ7Z309 247 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 FAM58AQ8N1B3 248 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 PINX1Q96BK5 328 aaKnown RBP20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 SCPEP1Q9HB40 452 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF195O14628 629 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 ALKBH6Q3KRA9 238 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 IKZF5Q9H5V7 419 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 KIAA1456Q9P272 454 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 A0A0A6YYJ9 748 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 IGLV3-27P01718 113 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 IAPPP10997 89 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 BPIFCQ8NFQ6 507 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 NUDCD2Q8WVJ2 157 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 TNFSF15O95150 251 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 CMTM4Q8IZR5 234 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 NECAP1Q8NC96 275 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 V9GYS6 101 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 LINC01565O15544 149 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 FABP1P07148 127 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 EGR3Q06889 387 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 SNTB1Q13884 538 aaKnown RBP20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 DMRTC1Q5HYR2 192 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 FLVCR2Q9UPI3 526 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 GIPP09681 153 aaPredicted RBP20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 CDC20BQ86Y33 519 aa20.11■□□□□ 0.81
TM9SF3-201ENST00000371142 ZGLP1P0C6A0 271 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 CCR5P51681 352 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 SNRPNP63162 240 aaKnown RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 FABP5Q01469 135 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 Q6ZNX1 250 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ZFP62Q8NB50 900 aaPredicted RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ISG20L2Q9H9L3 353 aaKnown RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF331Q9NQX6 463 aaPredicted RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 SLC17A4Q9Y2C5 497 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 BAMBIQ13145 260 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 PCK2Q16822 640 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 LOXHD1Q8IVV2 1947 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ADRA2CP18825 462 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 INSM1Q01101 510 aaPredicted RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 AGERQ15109 404 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 CADM3Q8N126 398 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 OR2W5A6NFC9 320 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 CLN3Q13286 438 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 PDZD11Q5EBL8 140 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 PLAC9Q5JTB6 97 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM123Q8N131 208 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 DEFB123Q8N688 67 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 GPR119Q8TDV5 335 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ATF6BQ99941 703 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 R4GMQ9 66 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 A3GALT2U3KPV4 340 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 MLF1P58340 268 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 AGBL4Q5VU57 503 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 H3F3CQ6NXT2 135 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 LCN15Q6UWW0 184 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 ST8SIA1Q92185 356 aa20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 URB1O60287 2271 aaKnown RBP20.1■□□□□ 0.81
TM9SF3-201ENST00000371142 TCRBV5S2A0A599 114 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 PMS2P1A4D2B8 440 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 CYHR1Q6ZMK1 362 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 CAMKMTQ7Z624 323 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 KCNE4Q8WWG9 221 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ROBO4Q8WZ75 1007 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 CDCA4Q9BXL8 241 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 TAF9Q16594 264 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM268Q5VZI3 342 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF573Q86YE8 665 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 FBXL6Q8N531 539 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 IGLV3-25P01717 112 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ADH4P08319 380 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 PAX6P26367 422 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 CSN1S1P47710 185 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 MRPL58Q14197 206 aaKnown RBP20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 RTL8BQ17RB0 113 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM179BQ7Z7N9 219 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 C1orf87Q8N0U7 546 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 KDF1Q8NAX2 398 aaPredicted RBP20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ORAI1Q96D31 301 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 LRFN5Q96NI6 719 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 A0A087WZY1 265 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 POU3F3P20264 500 aaPredicted RBP20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ASAH1Q13510 395 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ARPC3O15145 178 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 FCGR2CP31995 323 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF784Q8NCA9 323 aaPredicted RBP20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 LFNGQ8NES3 379 aa20.09■□□□□ 0.81
TM9SF3-201ENST00000371142 PPP1R2P9O14990 202 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 OR5G3P0C626 314 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 B4GALT1P15291 398 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 HRH1P35367 487 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 QPCTLQ9NXS2 382 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 CRYAAP02489 173 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 CCR2P41597 374 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 HAAOP46952 286 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 MED18Q9BUE0 208 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 ARRDC1-AS1Q9H2J1 176 aa20.08■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM231Q9H6L2 316 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms