RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 EGR3Q06889 387 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 CLEC18BQ6UXF7 455 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 FRMD1Q8N878 549 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 OR4C3Q8NH37 302 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 GAL3ST3Q96A11 431 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 OR2A5Q96R48 311 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 NEU1Q99519 415 aa10.43□□□□□ -0.74
SMARCA1-201ENST00000371121 A0A087WV62 115 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3DA0A087WVF3 549 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3IA0A087WXS9 549 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ELOA3DA6NLF2 546 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 C17orf51A8MQB3 221 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3LB9A6J9 549 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CTSBP07858 339 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 PI3P19957 117 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 GAB4Q2WGN9 574 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ELOA3BQ3SY89 546 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3CQ6IPX1 549 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TRAPPC6BQ86SZ2 158 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3Q8IZP1 549 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ELOA3Q8NG57 546 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ZCCHC10Q8TBK6 192 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ANKRD9Q96BM1 317 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 NTNG2Q96CW9 530 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 LPAR4Q99677 370 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 UCK1Q9HA47 277 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 LMAN1LQ9HAT1 526 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 IKZF2Q9UKS7 526 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 DCDC2BA2VCK2 349 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TXNDC12O95881 172 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 EBPQ15125 230 aaKnown RBP10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ZNF74Q16587 644 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 EEF1A1P5Q5VTE0 462 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 NSUN5P2Q63ZY6 315 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 LILRA6Q6PI73 481 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CLEC9AQ6UXN8 241 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ZNF614Q8N883 585 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 OR6N2Q8NGY6 317 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 OTOSQ8NHW6 89 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 HPSE2Q8WWQ2 592 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CUTCQ9NTM9 273 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 LAMP5Q9UJQ1 280 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 WIF1Q9Y5W5 379 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 C5orf51A6NDU8 294 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 IGLON5A6NGN9 336 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 HCRTR1O43613 425 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 RAMP1O60894 148 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TIMP1P01033 207 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 PMP2P02689 132 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CD63P08962 238 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CXCL1P09341 107 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 GNB3P16520 340 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 CDX1P47902 265 aaPredicted RBP10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 SQSTM1Q13501 440 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 MEP1BQ16820 701 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 PHF19Q5T6S3 580 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 Q6ZRG5 221 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 ADGRE4PQ86SQ3 457 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 NT5CQ8TCD5 201 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 MISP3Q96FF7 219 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TWSG1Q9GZX9 223 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 SLC26A1Q9H2B4 701 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 TAF9BQ9HBM6 251 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
SMARCA1-201ENST00000371121 PHOX2AO14813 284 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 KAT7O95251 611 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 CX3CR1P49238 355 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 AADACL3Q5VUY0 350 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 RSPRY1Q96DX4 576 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 NICN1Q9BSH3 213 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 ZDHHC8Q9ULC8 765 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 URADA6NGE7 173 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 INHAP05111 366 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 TBC1D3HP0C7X1 549 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 HIST1H1BP16401 226 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 ZNF708P17019 499 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 FSTP19883 344 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 DRD3P35462 400 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 GLP1RP43220 463 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 GABRA4P48169 554 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 GAMTQ14353 236 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 SLC17A1Q14916 467 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 FAM220AQ7Z4H9 259 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 ZNF565Q8N9K5 539 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 OR52R1Q8NGF1 315 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 TSEN15Q8WW01 171 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 LIPHQ8WWY8 451 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 ASB16Q96NS5 453 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 OR8B4Q96RC9 309 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 PRRT1Q99946 306 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 SLCO5A1Q9H2Y9 848 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 CNTD2Q9H8S5 307 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 ELOVL3Q9HB03 270 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 CAPN10Q9HC96 672 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 CCL16O15467 120 aa10.41□□□□□ -0.74
SMARCA1-201ENST00000371121 IFNA2P01563 188 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms