RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 PLPPR5Q32ZL2 321 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 SLC36A2Q495M3 483 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
LMO4-201ENST00000370542 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 BCDIN3DQ7Z5W3 292 aaKnown RBP13.17□□□□□ -0.3
LMO4-201ENST00000370542 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 FTMTQ8N4E7 242 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.17□□□□□ -0.3
LMO4-201ENST00000370542 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 OR6K3Q8NGY3 331 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
LMO4-201ENST00000370542 POC1BQ8TC44 478 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 GIMAP1Q8WWP7 306 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 MRPL48Q96GC5 212 aaKnown RBP13.17□□□□□ -0.3
LMO4-201ENST00000370542 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 NPAS1Q99742 590 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 ZCCHC4Q9H5U6 513 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 EQTNQ9NQ60 294 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 FBXO34Q9NWN3 711 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 PRR14LQ5THK1 2151 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 SHISA8B8ZZ34 492 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 ABCD4O14678 606 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 PLPP2O43688 288 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 SS18L1O75177 396 aaPredicted RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 SCO1O75880 301 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 ARL6IP5O75915 188 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 GIFP27352 417 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 THBS2P35442 1172 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 SLC6A8P48029 635 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 PRKAG1P54619 331 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 TSPAN5P62079 268 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 POU4F2Q12837 409 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 SNTB2Q13425 540 aaKnown RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 TNFAIP8L2Q6P589 184 aaPredicted RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 NLRC3Q7RTR2 1065 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 LHFPL3Q86UP9 236 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 STPG2Q8N412 459 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 ZNF527Q8NB42 609 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 DACT3Q96B18 629 aaPredicted RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 GMPPAQ96IJ6 420 aaPredicted RBP13.16□□□□□ -0.3
LMO4-201ENST00000370542 KLHL15Q96M94 604 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 KLHDC3Q9BQ90 382 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 REG4Q9BYZ8 158 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 OR10A4Q9H209 315 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 GLRX2Q9NS18 164 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 PROCRQ9UNN8 238 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 VDAC3Q9Y277 283 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 ZANQ9Y493 2812 aa13.16□□□□□ -0.3
LMO4-201ENST00000370542 CIB4A0PJX0 185 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 J3QRE1 110 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 AIPO00170 330 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ZNF593O00488 134 aaPredicted RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 RP2O75695 350 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 HMGN2P05204 90 aaKnown RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 IFNGR1P15260 489 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 PPP3CBP16298 524 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 CCR9P51686 369 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 CASP9P55211 416 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 TAS2R41P59536 307 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ACTC1P68032 377 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ACTA1P68133 377 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 SIRPAP78324 504 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 PIN1Q13526 163 aaPredicted RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 KLF9Q13886 244 aaPredicted RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 FIGNL1Q6PIW4 674 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 PRSS57Q6UWY2 283 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 OR2T33Q8NG76 320 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 OR6M1Q8NGM8 313 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 OR10D3Q8NH80 312 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 SMIM4Q8WVI0 70 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 PIGTQ969N2 578 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 ZNF649Q9BS31 505 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 CACYBPQ9HB71 228 aaKnown RBP13.15□□□□□ -0.3
LMO4-201ENST00000370542 RASD1Q9Y272 281 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 DSCAMO60469 2012 aa13.15□□□□□ -0.3
LMO4-201ENST00000370542 HEATR5AQ86XA9 2040 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms