RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SLC39A9Q9NUM3 307 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 NSG2Q9Y328 171 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 A8MWP6 167 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 C1QTNF3-AMACRE9PGA6 284 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 DVL2O14641 736 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 SEMG1P04279 462 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 C8AP07357 584 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 OR2T7P0C7T2 308 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 PRR35P0CG20 571 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 OMGP23515 440 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 SFTPDP35247 375 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 PAFAH1B2P68402 229 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 PITX1P78337 314 aaPredicted RBP9.5□□□□□ -0.89
PRDM1-201ENST00000369089 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 ZNF808Q8N4W9 903 aaPredicted RBP9.5□□□□□ -0.89
PRDM1-201ENST00000369089 ZFP62Q8NB50 900 aaPredicted RBP9.5□□□□□ -0.89
PRDM1-201ENST00000369089 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 PRODH2Q9UF12 536 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 MSRAQ9UJ68 235 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 B3GALT1Q9Y5Z6 326 aa9.5□□□□□ -0.89
PRDM1-201ENST00000369089 PCM1Q15154 2024 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 LOC100289279A0A1B0GTE1 492 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 A0A1W2PN81 502 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 NUDT14O95848 222 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 ACTL6AO96019 429 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CHRNA7P36544 502 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 PRLHRP49683 370 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 WNT3P56703 355 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM267Q0VDI3 215 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 LAIR1Q6GTX8 287 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 OR8G2PQ6IF36 304 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 BTNL8Q6UX41 500 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM91Q6ZNR0 172 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 IP6K3Q96PC2 410 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SMOC1Q9H4F8 434 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CNTD2Q9H8S5 307 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 RNF122Q9H9V4 155 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SLC25A17O43808 307 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CSNK2A2P19784 350 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SELENOVP59797 346 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 DCAF12L2Q5VW00 463 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TPGS2Q68CL5 300 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 METTL27Q8N6F8 245 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 NPWQ8N729 165 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 FAM3DQ96BQ1 224 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 KCND3Q9UK17 655 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 FUT9Q9Y231 359 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 HS3ST4Q9Y661 456 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 MYO10Q9HD67 2058 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 C9orf170A2RU37 121 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 OR2M5A3KFT3 312 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 ZNF850A8MQ14 1090 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 A8MVM7 634 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 FOXE1O00358 373 aaPredicted RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 IGHA1P01876 353 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 ACRP10323 421 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SLC11A1P49279 550 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SUCLG1P53597 346 aaKnown RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 PIGPP57054 158 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 GPR18Q14330 331 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 STUMQ69YW2 141 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 VITQ6UXI7 678 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 HMGN2P46Q86SG4 172 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 KREMEN2Q8NCW0 462 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 OR6T1Q8NGN1 323 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 DERL3Q96Q80 235 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM38AQ9H6F2 299 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 DEC1Q9P2X7 70 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 HSF4Q9ULV5 492 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 A0A1W2PPE3 182 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SLC22A20A6NK97 555 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 PPP1R3DO95685 299 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CRHP06850 196 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 SOD3P08294 240 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 STAG3L2P0CL84 134 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 LIMS3P0CW19 117 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 LIMS4P0CW20 117 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 PPP1CBP62140 327 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 ZNF154Q13106 437 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TESK1Q15569 626 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 FFAR4Q5NUL3 377 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 NUFIP2Q7Z417 695 aaKnown RBP9.49□□□□□ -0.89
PRDM1-201ENST00000369089 C1QL4Q86Z23 238 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CLDN19Q8N6F1 224 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 AMER3Q8N944 861 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 OR2T10Q8NGZ9 312 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 CD200R1Q8TD46 325 aa9.49□□□□□ -0.89
PRDM1-201ENST00000369089 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
PRDM1-201ENST00000369089 SIPA1L3O60292 1781 aaPredicted RBP9.48□□□□□ -0.89
PRDM1-201ENST00000369089 HEPACAM2A8MVW5 462 aa9.48□□□□□ -0.89
PRDM1-201ENST00000369089 GFYI3L273 518 aa9.48□□□□□ -0.89
PRDM1-201ENST00000369089 SEMA4FO95754 770 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms