RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TSPAN32Q96QS1 320 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 OR5B2Q96R09 309 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 PTDSS2Q9BVG9 487 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 ZNF700Q9H0M5 742 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 SLITRK2Q9H156 845 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 C20orf85Q9H1P6 137 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 EXOSC3Q9NQT5 275 aaKnown RBP9.52□□□□□ -0.89
TPM3-212ENST00000368533 PTTG3PQ9NZH4 202 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 GRHPRQ9UBQ7 328 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 MIOXQ9UGB7 285 aa9.52□□□□□ -0.89
TPM3-212ENST00000368533 LOC102723996A0A087X1L8 192 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ARPC1BO15143 372 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 SMAD9O15198 467 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 EIF4E2O60573 245 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 RAD1O60671 282 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 RP2O75695 350 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 SC5DO75845 299 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 OR6A2O95222 327 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 MAS1P04201 325 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ANXA7P20073 488 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 RAET1LQ5VY80 246 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 GRINAQ7Z429 371 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 PUSL1Q8N0Z8 303 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 BEST3Q8N1M1 668 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 SCARB1Q8WTV0 552 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 BIN3Q9NQY0 253 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 EMC3Q9P0I2 261 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 CAMK2AQ9UQM7 478 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ZNF281Q9Y2X9 895 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ARID1AO14497 2285 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 A0A1W2PQD3 144 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 DISC1C4P0D8 188 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 DOK2O60496 412 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 AHSA1O95433 338 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ACHEP22303 614 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 MMP15P51511 669 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 NANOS3P60323 173 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 PRPS1P60891 318 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 C9orf152Q5JTZ5 239 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 CDCP2Q5VXM1 449 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 C5orf46Q6UWT4 87 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TMUB2Q71RG4 321 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 YRDCQ86U90 279 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 TMPRSS12Q86WS5 348 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 LDLRAD3Q86YD5 345 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ZNF676Q8N7Q3 588 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 OR52I2Q8NH67 350 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 LRFN5Q96NI6 719 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TSNAXQ99598 290 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 GAL3ST1Q99999 423 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TAS2R5Q9NYW4 299 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 LAMP5Q9UJQ1 280 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 RAMP1O60894 148 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 CRYBA1P05813 215 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 ASAH2BP0C7U1 165 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 S100A11P31949 105 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 RPS11P62280 158 aaKnown RBP eCLIP9.51□□□□□ -0.89
TPM3-212ENST00000368533 MEP1BQ16820 701 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 C2orf68Q2NKX9 166 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TMEM176BQ3YBM2 270 aaPredicted RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 MESTQ5EB52 335 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 CARD17Q5XLA6 110 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 C12orf45Q8N5I9 185 aaPredicted RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 OR10K1Q8NGX5 313 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 SYNPRQ8TBG9 265 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 S100A16Q96FQ6 103 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 FKRPQ9H9S5 495 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 KLHL13Q9P2N7 655 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 KLK11Q9UBX7 282 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 CDV3Q9UKY7 258 aaKnown RBP9.51□□□□□ -0.89
TPM3-212ENST00000368533 V9GY05 133 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 DOCK7Q96N67 2140 aa9.51□□□□□ -0.89
TPM3-212ENST00000368533 TRAV36DV7A0A075B6V5 113 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 IFITM5A6NNB3 132 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 PIN1P1O15428 100 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 EIF1BO60739 113 aaKnown RBP9.5□□□□□ -0.89
TPM3-212ENST00000368533 TRAPPC6AO75865 159 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 GLCEO94923 617 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 ONECUT2O95948 504 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 BGLAPP02818 100 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 ANXA2P07355 339 aaKnown RBP9.5□□□□□ -0.89
TPM3-212ENST00000368533 TACSTD2P09758 323 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 GABRA1P14867 456 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 SPINK2P20155 84 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 EIF1P41567 113 aaKnown RBP9.5□□□□□ -0.89
TPM3-212ENST00000368533 FMODQ06828 376 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 EXT1Q16394 746 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 UBE2NLQ5JXB2 153 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 LIPNQ5VXI9 398 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 DPY19L4Q7Z388 723 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 NUP54Q7Z3B4 507 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 TEX19Q8NA77 164 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 OR5AK2Q8NH90 309 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 LIN37Q96GY3 246 aaPredicted RBP9.5□□□□□ -0.89
TPM3-212ENST00000368533 A8MVM7 634 aa9.5□□□□□ -0.89
TPM3-212ENST00000368533 MPZL1O95297 269 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms