RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RNASE1P07998 156 aaKnown RBP13.41□□□□□ -0.26
CKS1B-202ENST00000368436 CRABP1P29762 137 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 COX10Q12887 443 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 BAMBIQ13145 260 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 C9orf139Q6ZV77 190 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 KLBQ86Z14 1044 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 TSSK2Q96PF2 358 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 DUX5Q96PT3 197 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 MIOXQ9UGB7 285 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 RPS2P15880 293 aaKnown RBP13.4□□□□□ -0.26
CKS1B-202ENST00000368436 NUDT2P50583 147 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 MEP1BQ16820 701 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 GLYATQ6IB77 296 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 CORO6Q6QEF8 472 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 OR6V1Q8N148 313 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 PARP8Q8N3A8 854 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 UPRTQ96BW1 309 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 NEIL1Q96FI4 390 aaPredicted RBP13.4□□□□□ -0.26
CKS1B-202ENST00000368436 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 MS4A7Q9GZW8 240 aaPredicted RBP13.4□□□□□ -0.26
CKS1B-202ENST00000368436 KRCC1Q9NPI7 259 aaPredicted RBP13.4□□□□□ -0.26
CKS1B-202ENST00000368436 DCAF13Q9NV06 445 aaKnown RBP13.4□□□□□ -0.26
CKS1B-202ENST00000368436 POLR1DQ9Y2S0 133 aa13.4□□□□□ -0.26
CKS1B-202ENST00000368436 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 F5H5P2 479 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 ARPC3O15145 178 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 DIRAS1O95057 198 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 ZNF205O95201 554 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PPP1R3DO95685 299 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PLATP00750 562 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 IGHV4-38-2P0DP08 117 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 SELEP16581 610 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PMELP40967 661 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 GATA4P43694 442 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 CENPAP49450 140 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PSME3P61289 254 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 GNB2P62879 340 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 RFX4Q33E94 735 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 MOGAT3Q86VF5 341 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 SLC26A10Q8NG04 563 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 RAB40AQ8WXH6 277 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PLEKHA8Q96JA3 519 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
CKS1B-202ENST00000368436 SRA1Q9HD15 236 aaKnown RBP13.39□□□□□ -0.27
CKS1B-202ENST00000368436 TMEM100Q9NV29 134 aa13.39□□□□□ -0.27
CKS1B-202ENST00000368436 SAMD4AQ9UPU9 718 aaKnown RBP13.39□□□□□ -0.27
CKS1B-202ENST00000368436 PKD1L1Q8TDX9 2849 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 MDH1P40925 334 aaKnown RBP13.38□□□□□ -0.27
CKS1B-202ENST00000368436 MTNR1AP48039 350 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 SLC18B1Q6NT16 456 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 CFAP77Q6ZQR2 320 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.38□□□□□ -0.27
CKS1B-202ENST00000368436 ZBTB46Q86UZ6 589 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 C1orf87Q8N0U7 546 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 BHLHE23Q8NDY6 225 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 OR52J3Q8NH60 311 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 SLC25A28Q96A46 364 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 NMNAT3Q96T66 252 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 HCAR1Q9BXC0 346 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 WDR76Q9H967 626 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
CKS1B-202ENST00000368436 SOX21Q9Y651 276 aaPredicted RBP13.38□□□□□ -0.27
CKS1B-202ENST00000368436 MEGF8Q7Z7M0 2845 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 IGHV3-64DA0A0J9YX35 117 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 POM121CA8CG34 1229 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 RENP00797 406 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 SEMG1P04279 462 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 HLA-DPB1P04440 258 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 FPR3P25089 353 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 SLC6A6P31641 620 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 RAD23AP54725 363 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 IL13RA1P78552 427 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 ECH1Q13011 328 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 MAB21L1Q13394 359 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 GK2Q14410 553 aaPredicted RBP13.37□□□□□ -0.27
CKS1B-202ENST00000368436 KRT72Q14CN4 511 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 SLC36A3Q495N2 470 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 FAM201AQ5SY85 155 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 LEG1Q6P5S2 330 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 FANK1Q8TC84 345 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 Q8TCH9 128 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 ERGIC1Q969X5 290 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 OR8B2Q96RD0 313 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms