RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SULT1C2O00338 296 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 SHOXO15266 292 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 CXCL12P48061 93 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 SUMO3P55854 103 aaPredicted RBP16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 SSBP1Q04837 148 aaKnown RBP16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 OR52W1Q6IF63 320 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 OR1J2Q8NGS2 313 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 OR51E1Q8TCB6 317 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 C1orf198Q9H425 327 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 SDK2Q58EX2 2172 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 RAMP1O60894 148 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 ZNF735P0CB33 412 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 LAP3P28838 519 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 PTGDSP41222 190 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 CLRN1P58418 232 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 CDNFQ49AH0 187 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 COMMD2Q86X83 199 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 OR5L2Q8NGL0 311 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 RHBDD3Q9Y3P4 386 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 PI4KAP42356 2102 aa16.09■□□□□ 0.17
UBQLN4-201ENST00000368309 RAB27BO00194 218 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 UNC119Q13432 240 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 ATPAF1Q5TC12 328 aaPredicted RBP16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 FJX1Q86VR8 437 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 ZNF584Q8IVC4 421 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 UEVLDQ8IX04 471 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 C12orf45Q8N5I9 185 aaPredicted RBP16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 NUDCD2Q8WVJ2 157 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 MRPL13Q9BYD1 178 aaKnown RBP16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 SCPEP1Q9HB40 452 aa16.08■□□□□ 0.17
UBQLN4-201ENST00000368309 LOC390937A0A1W2PQ73 354 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 METTL21EPA6NDL7 271 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 ZFAND5O76080 213 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 ANOS1P23352 680 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 PRAMEF20Q5VT98 475 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 UPB1Q9UBR1 384 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 KCNN3Q9UGI6 736 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 IGHV5-10-1A0A0J9YXX1 117 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 DHPSP49366 369 aaPredicted RBP16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 OR1M1Q8NGA1 313 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 OR13C8Q8NGS7 320 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 MRGPRX4Q96LA9 322 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 SPSB2Q99619 263 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 WIF1Q9Y5W5 379 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 LHFPL6Q9Y693 200 aa16.08■□□□□ 0.16
UBQLN4-201ENST00000368309 ARPC4-TTLL3A0A0A6YYG9 625 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 K7ESF4 209 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 ABOP16442 354 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 CXADRP78310 365 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 NKAIN3Q8N8D7 197 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 CCDC107Q8WV48 283 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 SHDQ96IW2 340 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 SLC25A21Q9BQT8 299 aaPredicted RBP16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 RAB22AQ9UL26 194 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 HMSDA8MTL9 139 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 SIGLEC6O43699 453 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 RP2O75695 350 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 PMS2P2O95744 297 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 PPP3CBP16298 524 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 GNB3P16520 340 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 CLDN6P56747 220 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 TRAPPC6BQ86SZ2 158 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 ALX4Q9H161 411 aaPredicted RBP16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 ASH2LQ9UBL3 628 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 SLC5A6Q9Y289 635 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 GFOD2Q3B7J2 385 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 TMEM176BQ3YBM2 270 aaPredicted RBP16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 ZNF260Q3ZCT1 412 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 ANGPTL5Q86XS5 388 aa16.07■□□□□ 0.16
UBQLN4-201ENST00000368309 NPIPB13A6NJU9 1138 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 NPIPB4C9JG80 1138 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 RER1O15258 196 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 HSD11B1P28845 292 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 GMFBP60983 142 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 DHRS2Q13268 280 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 TAF13Q15543 124 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 LY6G6FQ5SQ64 297 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 THEM4Q5T1C6 240 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 LIN54Q6MZP7 749 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 STEAP2Q8NFT2 490 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 FOXRED1Q96CU9 486 aaPredicted RBP16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 CYYR1Q96J86 154 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 CCDC74BQ96LY2 380 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 DEFB126Q9BYW3 111 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 SELENOIQ9C0D9 397 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 MFFQ9GZY8 342 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 SLCO5A1Q9H2Y9 848 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 TOX3O15405 576 aaPredicted RBP16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 PTCRAQ6ISU1 281 aaPredicted RBP16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 C3orf33Q6P1S2 294 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 OR5D14Q8NGL3 314 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 AQP3Q92482 292 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 OCIAD1Q9NX40 245 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 WNT16Q9UBV4 365 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 H3BUI4 141 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 CCSO14618 274 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 NAGAP17050 411 aa16.06■□□□□ 0.16
UBQLN4-201ENST00000368309 OR2AJ1Q8NGZ0 328 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms