RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 COL22A1Q8NFW1 1626 aaPredicted RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 WDR19Q8NEZ3 1342 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 KCNE1BA0A087WTH5 132 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TRAV25A0A0B4J276 109 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 KBTBD11-OT1A0A1B0GTJ5 212 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TMEM223A0PJW6 202 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 COLCA2A8K830 154 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 PLPP1O14494 284 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RBFOX2O43251 390 aaKnown RBP eCLIP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 NMT2O60551 498 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RBBP9O75884 186 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 LSM8O95777 96 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 ASGR1P07306 291 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CTSLP07711 333 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 LINC00869P0C866 280 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 ERGP11308 486 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 GABRG2P18507 467 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 EIF2S2P20042 333 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RAB3AP20336 220 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 NPY1RP25929 384 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 HCAR3P49019 387 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CDKN2DP55273 166 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 UBE2NP61088 152 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RPS23P62266 143 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 IRF4Q15306 451 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 PGGHGQ32M88 737 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TRMT5Q32P41 509 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 SMUG1Q53HV7 270 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 GCSAMLQ5JQS6 135 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TTC23LQ6PF05 361 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 MBOAT2Q6ZWT7 520 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 UBALD2Q8IYN6 164 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 PRSS58Q8IYP2 241 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 FAM71AQ8IYT1 594 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 KATNAL2Q8IYT4 538 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RNF182Q8N6D2 247 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 COX18Q8N8Q8 333 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CHST4Q8NCG5 386 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 OR4K5Q8NGD3 323 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 OR52K2Q8NGK3 314 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 DEDD2Q8WXF8 326 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CTRCQ99895 268 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 UQCC2Q9BRT2 126 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 ZYG11BQ9C0D3 744 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 PARP12Q9H0J9 701 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 AUNIPQ9H7T9 357 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC38A10Q9HBR0 1119 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 HMG20AQ9NP66 347 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 RABL2AQ9UBK7 228 aaPredicted RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CTSFQ9UBX1 484 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 CLN8Q9UBY8 286 aa1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TRMT112Q9UI30 125 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-201ENST00000368287 TTC41PQ6P2S7 1318 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 PCDH11XQ9BZA7 1347 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 IGLV2-18A0A075B6J9 118 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SMIM26A0A096LP01 95 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 DNASE2O00115 360 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 NME4O00746 187 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 BCKDKO14874 412 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SIVA1O15304 175 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SOCS1O15524 211 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 AKR7A2O43488 359 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 FCN3O75636 299 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 CCNKO75909 580 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 HBE1P02100 147 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 IFNW1P05000 195 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 OR8U9P0C7N5 309 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF286BP0CG31 522 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 MUC1P15941 1255 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 WARSP23381 471 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 HMOX2P30519 316 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC11A1P49279 550 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 RAB7AP51149 207 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 P2RX1P51575 399 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 NDUFA8P51970 172 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 CACNG7P62955 275 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 RBMY1FQ15415 496 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 GABRA6Q16445 453 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 TPTE2P1Q5T6R2 138 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SPESP1Q6UW49 350 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SSX9Q7RTT3 188 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 WDFY1Q8IWB7 410 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 LYPD1Q8N2G4 141 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 OR11H7Q8NGC8 314 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 OR5AR1Q8NGP9 310 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 COQ8AQ8NI60 647 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 AGR3Q8TD06 166 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 PTX4Q96A99 478 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 FLYWCH2Q96CP2 140 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 NRBF2Q96F24 287 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 GSDMAQ96QA5 445 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF382Q96SR6 550 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 FOXC2Q99958 501 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SAMD10Q9BYL1 202 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 FAM49BQ9NUQ9 324 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 MYEF2Q9P2K5 600 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms