RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MSI2Q96DH6 328 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 MEIOCA2RUB1 952 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 MAGEB4O15481 346 aaPredicted RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 NKX2-8O15522 239 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 FCARP24071 287 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 RELAQ04206 551 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 TMPRSS11FQ6ZWK6 438 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 GTPBP8Q8N3Z3 284 aaPredicted RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 FOXB1Q99853 325 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF768Q9H5H4 540 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 DNAJB12Q9NXW2 375 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 ARPC3O15145 178 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 PCSK6P29122 969 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 DYRK1AQ13627 763 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 CLVS2Q5SYC1 327 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 PDZD9Q8IXQ8 264 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 C1orf87Q8N0U7 546 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 OR52H1Q8NGJ2 320 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 GPR84Q9NQS5 396 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 KIF25Q9UIL4 384 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 POLDIP2Q9Y2S7 368 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 FAM221AA4D161 298 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 HSPB2A8KAH6 182 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 CCL2P13500 99 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 RPP30P78346 268 aaKnown RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SLC17A1Q14916 467 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 HSPB2Q16082 182 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 LACC1Q8IV20 430 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ITPKCQ96DU7 683 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 FAM210AQ96ND0 272 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 TAS2R4Q9NYW5 299 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 LY75O60449 1722 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 LILRB5O75023 590 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 EPHA2P29317 976 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 RPS19P39019 145 aaKnown RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 MRM1Q6IN84 353 aaKnown RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 LPCAT3Q6P1A2 487 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 KCNJ15Q99712 375 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ABHD6Q9BV23 337 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 RBFOX1Q9NWB1 397 aaKnown RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SIRT5Q9NXA8 310 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 MEIKINA0A087WXM9 373 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 TIAL1Q01085 375 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 LYPD4Q6UWN0 246 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SUN5Q8TC36 379 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SGK3Q96BR1 496 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ZG16BQ96DA0 208 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SERTAD4Q9NUC0 356 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 KIR2DS1A0A191URI9 304 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 BHLHE40O14503 412 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF728P0DKX0 622 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 KIR2DS4P43632 304 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF133P52736 654 aaPredicted RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 KIR2DS1Q14954 304 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 CDK5R1Q15078 307 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SOWAHCQ53LP3 525 aaPredicted RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM211Q6ICI0 200 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 MDGA2Q7Z553 956 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 NRARPQ7Z6K4 114 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 NUBPLQ8TB37 319 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 OR2M2Q96R28 347 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 NTN4Q9HB63 628 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SLC22A13Q9Y226 551 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 SULT1B1O43704 296 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 RGS11O94810 467 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 CT62P0C5K7 136 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 MAGEA5P43359 124 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF92Q03936 586 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 GPR32P1Q8NGA4 272 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 GPR87Q9BY21 358 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 PLA2G12AQ9BZM1 189 aa10.44□□□□□ -0.74
SYNE1-204ENST00000367248 MYO5AQ9Y4I1 1855 aaKnown RBP10.44□□□□□ -0.74
SYNE1-204ENST00000367248 NCBP2LA6PVI3 153 aaKnown RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 IFNA10P01566 189 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ANXA7P20073 488 aaKnown RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 OMGP23515 440 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 FZD5Q13467 585 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 RBMXL3Q8N7X1 1067 aaKnown RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 PLPP5Q8NEB5 264 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 OR51A2Q8NGJ7 313 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF649Q9BS31 505 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 JAM3Q9BX67 310 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 MLXQ9UH92 298 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 EXO1Q9UQ84 846 aaKnown RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 IMPA2O14732 288 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 EGR3Q06889 387 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ISXQ2M1V0 245 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 OR51F2Q8NH61 342 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ISYNA1Q9NPH2 558 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 RAB1AP62820 205 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 PCK2Q16822 640 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 STEAP1BQ6NZ63 245 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 BEST4Q8NFU0 473 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 SLC35B4Q969S0 331 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 KIRREL1Q96J84 757 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 FBXO34Q9NWN3 711 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms