RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ACSM4P0C7M7 580 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 T-ENOLP0DO92 83 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TNFSF4P23510 183 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NOS3P29474 1203 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CENPAP49450 140 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MNAT1P51948 309 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MS4A2Q01362 244 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZMYND11Q15326 602 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC36A3Q495N2 470 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC35F1Q5T1Q4 408 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2T2Q6IF00 324 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LCN8Q6JVE9 175 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 USP43Q70EL4 1123 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PEG10Q86TG7 708 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NAA40Q86UY6 237 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LINC00346Q8IVM7 164 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ARHGAP24Q8N264 748 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR4M2Q8NGB6 313 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR9Q2Q8NGE9 314 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR10S1Q8NGN2 331 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZFAND2BQ8WV99 257 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NSL1Q96IY1 281 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MAP6Q96JE9 813 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2V2Q96R30 315 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC30A2Q9BRI3 323 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MAGIXQ9H6Y5 334 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 POLR1DQ9Y2S0 133 aa11.51□□□□□ -0.57
TNFRSF1A-202ENST00000366159 F5H0A9 414 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 H0YL77 283 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TNFRSF11BO00300 401 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SURF4O15260 269 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PSKH1P11801 424 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OTX1P32242 354 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC6A9P48067 706 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MXRA7P84157 204 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ECH1Q13011 328 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TRIM25Q14258 630 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PCK2Q16822 640 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RPL13AP3Q6NVV1 102 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC27A4Q6P1M0 643 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RASSF6Q6ZTQ3 369 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR5AS1Q8N127 324 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LNX2Q8N448 690 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TEX29Q8N6K0 151 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ATF6BQ99941 703 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MUC13Q9H3R2 512 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 VNN3Q9NY84 501 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 KCNG2Q9UJ96 466 aa11.5□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ISPDA4D126 451 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 A8MXK9 166 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TRAPPC2LH3BP13 241 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 FSTL3O95633 263 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SBK2P0C263 348 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ANOS1P23352 680 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MMP16P51512 607 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 HILS1P60008 231 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 BTG1P62324 171 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LCN2P80188 198 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TRAP1Q12931 704 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GK2Q14410 553 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF181Q2M3W8 571 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF582Q96NG8 517 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NMNAT2Q9BZQ4 307 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MMP26Q9NRE1 261 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DDX28Q9NUL7 540 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 UBAP1Q9NZ09 502 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
TNFRSF1A-202ENST00000366159 F5H5K5 113 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 IFNL4K9M1U5 179 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 FOXH1O75593 365 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CCNB2O95067 398 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 FAM107AO95990 144 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 EPHA1P21709 976 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PMELP40967 661 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 GATA4P43694 442 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SEC61A1P61619 476 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PAX2Q02962 417 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PPP1R8Q12972 351 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MICAQ29983 383 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SHQ1Q6PI26 577 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SPICQ8N5J4 248 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CYB561A3Q8NBI2 242 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms