RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ZNF425Q6IV72 752 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 NR2C2APQ86WQ0 139 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR8B4Q96RC9 309 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 PRELID3BQ9Y3B1 194 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 A0A1W2PNR3 127 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 ALOX12BO75342 701 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 F12P00748 615 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 IFNA2P01563 188 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 CTHP32929 405 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 IDH3GP51553 393 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 PSG6Q00889 435 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 TMEM240Q5SV17 173 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 C9orf135Q5VTT2 229 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR1M1Q8NGA1 313 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR5M9Q8NGP3 310 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 ATOH1Q92858 354 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR51B6Q9H340 312 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 NXT1Q9UKK6 140 aaKnown RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 PCDHGA9Q9Y5G4 932 aaKnown RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 PDCD11Q14690 1871 aaKnown RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF44P15621 663 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 CD96P40200 585 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 CLDN17P56750 224 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 GPR85P60893 370 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 LRP12Q9Y561 859 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 NRG2O14511 850 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 XRCC2O43543 280 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 LRP3O75074 770 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 NDUFA6P56556 154 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 TAS2R46P59540 309 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 UBE2KP61086 200 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 YPEL5P62699 121 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 C1orf123Q9NWV4 160 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 WNT11O96014 354 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 GLAP06280 429 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 GABREP78334 506 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ARL6IP1Q15041 203 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 PIGCQ92535 297 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 FGF14Q92915 247 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 HGDQ93099 445 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 LRFN5Q96NI6 719 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 CES1P1Q9UKY3 287 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ZMIZ1Q9ULJ6 1067 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF236Q9UL36 1845 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 SHISA8B8ZZ34 492 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ADAP1O75689 374 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 SLC34A2O95436 690 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 CSNK1EP49674 416 aaKnown RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 NAA40Q86UY6 237 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 PGLYRP3Q96LB9 341 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF578Q96N58 590 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 SSX3Q99909 188 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 GPR84Q9NQS5 396 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 MGAMO43451 1857 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 PLXNB2O15031 1838 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 TXNDC12O95881 172 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 EPPINO95925 133 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 RECKO95980 971 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 ABOP16442 354 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 H1FNTQ75WM6 255 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-201ENST00000361866 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 GPR137CQ8N3F9 429 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 FAM181AQ8N9Y4 354 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 OR5L1Q8NGL2 311 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 SECTM1Q8WVN6 248 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 AKR1E2Q96JD6 320 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 MRGPRX1Q96LB2 322 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 RHOFQ9HBH0 211 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 FGF21Q9NSA1 209 aa12.54□□□□□ -0.4
COL6A1-201ENST00000361866 SPTA1P02549 2419 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 IL33O95760 270 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CPN1P15169 458 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 FCGR2CP31995 323 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 FAM53BQ14153 422 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SHHQ15465 462 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SSX9Q7RTT3 188 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SLC19A3Q9BZV2 496 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 HAO2Q9NYQ3 351 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms