RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EIF4E2O60573 245 aaKnown RBP12.66□□□□□ -0.38
SMC5-201ENST00000361138 ZNF85Q03923 595 aa12.66□□□□□ -0.38
SMC5-201ENST00000361138 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
SMC5-201ENST00000361138 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
SMC5-201ENST00000361138 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
SMC5-201ENST00000361138 C7orf66A4D0T2 115 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 PCBD1P61457 104 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 MFAP5Q13361 173 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 MIDNQ504T8 468 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 B4GALT7Q9UBV7 327 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 FAM96BQ9Y3D0 163 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 NUP205Q92621 2012 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
SMC5-201ENST00000361138 WNT11O96014 354 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 SMIM6P0DI80 62 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 MSR1P21757 451 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 GUK1Q16774 197 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 MRM1Q6IN84 353 aaKnown RBP12.65□□□□□ -0.38
SMC5-201ENST00000361138 LAIR2Q6ISS4 152 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
SMC5-201ENST00000361138 ING1Q9UK53 422 aaPredicted RBP12.65□□□□□ -0.38
SMC5-201ENST00000361138 HTR5AP47898 357 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 PPP1R1AQ13522 171 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 ETFDHQ16134 617 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 ZNF75AQ96N20 296 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 SLC23A2Q9UGH3 650 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 SLC5A6Q9Y289 635 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 HSPB6O14558 160 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 BCKDHBP21953 392 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 APLNRP35414 380 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 CSRP3P50461 194 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 CBLN2Q8IUK8 224 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 NECAP1Q8NC96 275 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 TSLPQ969D9 159 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 ADAM19Q9H013 955 aa12.65□□□□□ -0.38
SMC5-201ENST00000361138 A0A0B4J2E0 115 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 A0A1B0GX12 115 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 ARGFXA6NJG6 315 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 CST4P01036 141 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 CD79AP11912 226 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.39
SMC5-201ENST00000361138 FAM78AQ5JUQ0 283 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 KIRREL2Q6UWL6 708 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 SIGLEC11Q96RL6 698 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 SUCNR1Q9BXA5 334 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 SIRT3Q9NTG7 399 aaPredicted RBP12.65□□□□□ -0.39
SMC5-201ENST00000361138 GDE1Q9NZC3 331 aa12.65□□□□□ -0.39
SMC5-201ENST00000361138 MPC2O95563 127 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 CFIP05156 583 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SLC2A1P11166 492 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SLC35A1P78382 337 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 C17orf67Q0P5P2 114 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 IKZF1Q13422 519 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 OR52N5Q8NH56 324 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 UHRF2Q96PU4 802 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 CDK2AP1O14519 115 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SSSCA1O60232 199 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 TUSC2O75896 110 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 CLDN1O95832 211 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SRYQ05066 204 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 TOMM34Q15785 309 aaPredicted RBP12.64□□□□□ -0.39
SMC5-201ENST00000361138 ZNF77Q15935 545 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 GSTP1P09211 210 aaKnown RBP12.64□□□□□ -0.39
SMC5-201ENST00000361138 HLA-DOBP13765 273 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SLC38A9Q8NBW4 561 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 STT3BQ8TCJ2 826 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 NANOS1Q8WY41 292 aaKnown RBP12.64□□□□□ -0.39
SMC5-201ENST00000361138 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 RAB18Q9NP72 206 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 UQCC1Q9NVA1 299 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 MRPL22Q9NWU5 206 aaKnown RBP12.64□□□□□ -0.39
SMC5-201ENST00000361138 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 ZFPL1O95159 310 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 VWA2Q5GFL6 755 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
SMC5-201ENST00000361138 TMEM91Q6ZNR0 172 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 AKR7LQ8NHP1 331 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 SEC11CQ9BY50 192 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 PBOV1Q9GZY1 135 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
SMC5-201ENST00000361138 MFSD2BA6NFX1 497 aa12.63□□□□□ -0.39
SMC5-201ENST00000361138 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
SMC5-201ENST00000361138 INPP5JQ15735 1006 aaPredicted RBP12.63□□□□□ -0.39
SMC5-201ENST00000361138 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
SMC5-201ENST00000361138 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
SMC5-201ENST00000361138 THAP10Q9P2Z0 257 aaPredicted RBP12.63□□□□□ -0.39
SMC5-201ENST00000361138 OPN4Q9UHM6 478 aa12.63□□□□□ -0.39
SMC5-201ENST00000361138 MMACHCQ9Y4U1 282 aa12.63□□□□□ -0.39
SMC5-201ENST00000361138 IDSB3KWA1 339 aa12.63□□□□□ -0.39
SMC5-201ENST00000361138 NPIPB8E9PQR5 432 aa12.63□□□□□ -0.39
SMC5-201ENST00000361138 METTL15P1P0C7V9 234 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms