RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 BLVRAP53004 296 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SCAND1P57086 179 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 NANOS3P60323 173 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 CLLU1Q5K131 121 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 OLFML2AQ68BL7 652 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC35D2Q76EJ3 337 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 NLRC3Q7RTR2 1065 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF519Q8TB69 540 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 THRSPQ92748 146 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 OR10A4Q9H209 315 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 METTL17Q9H7H0 456 aaPredicted RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 NOX3Q9HBY0 568 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 FKBP7Q9Y680 259 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 PRSS37A4D1T9 235 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF814B7Z6K7 855 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 B8ZZF3 427 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 DNPH1O43598 174 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 CEACAM4O75871 244 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 ADRB1P08588 477 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 IFNGR1P15260 489 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 PPIAP62937 165 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 IGFL2Q6UWQ7 119 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 STAC2Q6ZMT1 411 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 WDFY1Q8IWB7 410 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SPACA3Q8IXA5 215 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SPICQ8N5J4 248 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 MEIOBQ8N635 442 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 COMMD4Q9H0A8 199 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SYT4Q9H2B2 425 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 BEX1Q9HBH7 125 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 OR5V1Q9UGF6 321 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 MAB21L2Q9Y586 359 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 TMEM14AQ9Y6G1 99 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 H7C1C5 153 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 PSMD9O00233 223 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 TNFSF11O14788 317 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 RPP14O95059 124 aaKnown RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 CPN1P15169 458 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF43P17038 809 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 EIF2S3P41091 472 aaKnown RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 PTH2RP49190 550 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 VEGFCP49767 419 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 LCN6P62502 163 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 MELKQ14680 651 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 GRK1Q15835 563 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 HSPB2Q16082 182 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF239Q16600 458 aaKnown RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 PDSS1Q5T2R2 415 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 GLDNQ6ZMI3 551 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 IDO2Q6ZQW0 420 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 SERPINA12Q8IW75 414 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 SPERTQ8NA61 448 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ZFP62Q8NB50 900 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ASB10Q8WXI3 467 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-201ENST00000360718 ARPC4-TTLL3A0A0A6YYG9 625 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 A0A0J9YW62 118 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 SNRPGP15A8MWD9 76 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 M0R233 179 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 EIF1AYO14602 144 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 PHYHO14832 338 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ARPC1BO15143 372 aaKnown RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 RAMP1O60894 148 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 VAMP5O95183 116 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 PDGFAP04085 211 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 IL5P05113 134 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 NAT1P18440 290 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 MAGEA5P43359 124 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 P2RY4P51582 365 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 CARD18P57730 90 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ZP1P60852 638 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 HYAL4Q2M3T9 481 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 PM20D2Q8IYS1 436 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 UXS1Q8NBZ7 420 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 ORAI1Q96D31 301 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 KLK11Q9UBX7 282 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
SQSTM1-201ENST00000360718 FLVCR2Q9UPI3 526 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms