RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 OR51J1Q9H342 316 aa16.19■□□□□ 0.18
PDLIM7-203ENST00000359895 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-203ENST00000359895 MTFP1Q9UDX5 166 aa16.19■□□□□ 0.18
PDLIM7-203ENST00000359895 A0A0G2JMM0 328 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 LOC101059948A0A1B0GTJ6 334 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 A0A1W2PPB8 328 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 A0A1W2PRS3 328 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 DCDC2BA2VCK2 349 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 FAM172BPA6NC97 362 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 LRRC3CA6NJW4 275 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 KIR3DP1A8MWS1 328 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 SULT1C2O00338 296 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 DOK2O60496 412 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 C1QBP02746 253 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 ERCC1P07992 297 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 CSF1P09603 554 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 RAB6AP20340 208 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 ENPP1P22413 925 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 CTSSP25774 331 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF84P51523 738 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 CLDN6P56747 220 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 YRDCQ86U90 279 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 GJC3Q8NFK1 279 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 OR1M1Q8NGA1 313 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 OR51A2Q8NGJ7 313 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 PSMF1Q92530 271 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF385AQ96PM9 386 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 EDEM2Q9BV94 578 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 C20orf85Q9H1P6 137 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 TMEM138Q9NPI0 162 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 STMN3Q9NZ72 180 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 MRPL15Q9P015 296 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 ABI3Q9P2A4 366 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 CGGBP1Q9UFW8 167 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 BOKQ9UMX3 212 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 WDR87Q6ZQQ6 2873 aa16.18■□□□□ 0.18
PDLIM7-203ENST00000359895 TRAV18A0A075B6X5 111 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 IGHV3-15A0A0B4J1V0 119 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 LINC01387J3KSC0 135 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 TERTO14746 1132 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 LDLRAD4O15165 306 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 DHHO43323 396 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 PEX14O75381 377 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 WDPCPO95876 746 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 PRSS3P35030 304 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 GNALP38405 381 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 CASRP41180 1078 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 CARD18P57730 90 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 OC90Q02509 493 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 GSG1Q2KHT4 349 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF813Q6ZN06 617 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 FGD2Q7Z6J4 655 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 LYPD6Q86Y78 171 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 OR1J2Q8NGS2 313 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 SFXN2Q96NB2 322 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 FAM210AQ96ND0 272 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 UQCC2Q9BRT2 126 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF416Q9BWM5 594 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 SRXN1Q9BYN0 137 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 TP63Q9H3D4 680 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZFP64Q9NPA5 681 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 MRPS18BQ9Y676 258 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 A0A1B0GTI1 187 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 A0A1W2PNU3 283 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 RGS13O14921 159 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 SMAD9O15198 467 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 RER1O15258 196 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 GMDSO60547 372 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 LMX1BO60663 402 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF20P17024 532 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 RAB3AP20336 220 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 CX3CR1P49238 355 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 PRKXP51817 358 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF121P58317 390 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 SFRP4Q6FHJ7 346 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 C20orf196Q8IYI0 205 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 SLC22A24Q8N4F4 322 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF283Q8N7M2 679 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 ZIC4Q8N9L1 334 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 OR8B12Q8NGG6 310 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 IP6K3Q96PC2 410 aa16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 FOXD3Q9UJU5 478 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-203ENST00000359895 MED12Q93074 2177 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 PTHLHP12272 177 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 CCL1P22362 96 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 HIST1H3AP68431 136 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 CDK10Q15131 360 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 PHYHD1Q5SRE7 291 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 HIST2H3PS2Q5TEC6 136 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 ABHD17BQ5VST6 288 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 ZNF529Q6P280 563 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 HIST2H3AQ71DI3 136 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 PGAP1Q75T13 922 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 GGNQ86UU5 652 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 CDH26Q8IXH8 852 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 OR2V1Q8NHB1 315 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 OR51E1Q8TCB6 317 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 GIMAP1Q8WWP7 306 aa16.16■□□□□ 0.18
PDLIM7-203ENST00000359895 ULBP2Q9BZM5 246 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms