RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 NPSR1Q6W5P4 371 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 GDPD3Q7L5L3 318 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 SLC36A1Q7Z2H8 476 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 MOGAT3Q86VF5 341 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 BHLHE22Q8NFJ8 381 aaPredicted RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 SLC41A3Q96GZ6 507 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ST6GAL2Q96JF0 529 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF347Q96SE7 839 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 OR2B2Q9GZK3 357 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 FN3KQ9H479 309 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 RNF167Q9H6Y7 350 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 MOV10Q9HCE1 1003 aaKnown RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 SIRT7Q9NRC8 400 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 LPAR3Q9UBY5 353 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 AASSQ9UDR5 926 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 RAI1Q7Z5J4 1906 aaPredicted RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 IGHV1-69-2A0A0G2JMI3 117 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 FAM230AA0A1W2PPH8 454 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 F2RL2O00254 374 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 CCDC159P0C7I6 412 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 CPN1P15169 458 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 PSMB1P20618 241 aaKnown RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 SLC6A6P31641 620 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 THBS4P35443 961 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 RASSF2P50749 326 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 EIF2B1Q14232 305 aaKnown RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 MICBQ29980 383 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 KCTD21Q4G0X4 260 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF385BQ569K4 471 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 LRRC10Q5BKY1 277 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF628Q5EBL2 1059 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 COQ5Q5HYK3 327 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ERICH5Q6P6B1 374 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 AMIGO2Q86SJ2 522 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 C1QL4Q86Z23 238 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 CLDN22Q8N7P3 220 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 OR5T2Q8NGG2 359 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 OR9Q1Q8NGQ5 310 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 SFXN5Q8TD22 340 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF675Q8TD23 568 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 NEU4Q8WWR8 484 aaPredicted RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 RCN3Q96D15 328 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 PIP5K1AQ99755 562 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 FOXC2Q99958 501 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 FAM234AQ9H0X4 552 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 VCXQ9H320 206 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 UNKLQ9H9P5 680 aaKnown RBP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMC1B-201ENST00000357450 NDE1Q9NXR1 346 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 VAPAQ9P0L0 249 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 TIMM10BQ9Y5J6 103 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 IER3IP1Q9Y5U9 82 aa3.3□□□□□ -1.88
SMC1B-201ENST00000357450 MXRA5Q9NR99 2828 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 IGHV4-30-2A0A087WSY4 118 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 IGKV3D-11A0A0A0MRZ8 115 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 PNMA8CA0A1B0GUJ8 204 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 A0A1B0GVI7 797 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ZC3H12DA2A288 527 aaKnown RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 A6NIZ1 184 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 NCBP2LA6PVI3 153 aaKnown RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SLC1A7O00341 560 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 HLA-DPB1P04440 258 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SOD3P08294 240 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 GAAP10253 952 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 BTF3P20290 206 aaKnown RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ELK4P28324 431 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SHC1P29353 583 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 LHX2P50458 406 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 DAPP51397 102 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SH3BGRP55822 239 aaPredicted RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 RAP1BP61224 184 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 PPP1CBP62140 327 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 RAP1AP62834 184 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 CDSNQ15517 529 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ATAD3CQ5T2N8 411 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF691Q5VV52 312 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 C1orf146Q5VVC0 180 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 CORO6Q6QEF8 472 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ZNF836Q6ZNA1 936 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 OR6V1Q8N148 313 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 LINC01356Q8N9X3 169 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 OR13G1Q8NGZ3 307 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 OR6S1Q8NH40 331 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 RNASE11Q8TAA1 199 aaKnown RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 ADGRG7Q96K78 797 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 HRASLS5Q96KN8 279 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 CGREF1Q99674 301 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SP140LQ9H930 580 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 TMEM100Q9NV29 134 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 LAMP5Q9UJQ1 280 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 LOC105371242A0A075B767 164 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 TRAV40A0A0B4J280 105 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 MBD3L3A6NE82 208 aaPredicted RBP3.29□□□□□ -1.88
SMC1B-201ENST00000357450 SNTNA6NMZ2 147 aa3.29□□□□□ -1.88
SMC1B-201ENST00000357450 J3QRK9 145 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms