RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FITM1A5D6W6 292 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 TCAPO15273 167 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 LRP3O75074 770 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 TMEM268Q5VZI3 342 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 ZNF813Q6ZN06 617 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 OR2A1Q8NGT9 310 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 HGDQ93099 445 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 CMBLQ96DG6 245 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 MS4A10Q96PG2 267 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 ATF6BQ99941 703 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 CGGBP1Q9UFW8 167 aaPredicted RBP11.73□□□□□ -0.53
SMC4-202ENST00000357388 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 HS3ST3A1Q9Y663 406 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 LOC107986453A0A1B0GWG9 222 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 IFITM5A6NNB3 132 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
SMC4-202ENST00000357388 RTL8BQ17RB0 113 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 C9orf152Q5JTZ5 239 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 YOD1Q5VVQ6 348 aaPredicted RBP11.73□□□□□ -0.53
SMC4-202ENST00000357388 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
SMC4-202ENST00000357388 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 TM4SF18Q96CE8 201 aa11.73□□□□□ -0.53
SMC4-202ENST00000357388 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 SLC25A6P12236 298 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 EN2P19622 333 aaPredicted RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 FAM71E1Q6IPT2 247 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 UBE3DQ7Z6J8 389 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 CMTM4Q8IZR5 234 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 SCMH1Q96GD3 660 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 DCAF16Q9NXF7 216 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 PMS2P1A4D2B8 440 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 AP4M1O00189 453 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 MFSD12Q6NUT3 480 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 ZNF511Q8NB15 262 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 PPP1R1CQ8WVI7 109 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 ABCD4O14678 606 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 CD27P26842 260 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 PRAMEF20Q5VT98 475 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 SLC48A1Q6P1K1 146 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 LINC00346Q8IVM7 164 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 TRIB1Q96RU8 372 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 FGF20Q9NP95 211 aaPredicted RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 CHST2Q9Y4C5 530 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
SMC4-202ENST00000357388 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 ARHGEF39Q8N4T4 335 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 OR2G2Q8NGZ5 317 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 C11orf40Q8WZ69 217 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 SMIM19Q96E16 107 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 HDAC8Q9BY41 377 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
SMC4-202ENST00000357388 PMCHP20382 165 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 SELENBP1Q13228 472 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 TPBGQ13641 420 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 XKR7Q5GH72 579 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 HSD17B13Q7Z5P4 300 aaPredicted RBP11.71□□□□□ -0.53
SMC4-202ENST00000357388 ACER3Q9NUN7 267 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 SLC25A4P12235 298 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 GALR1P47211 349 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 ADAMTSL4Q6UY14 1074 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 FUNDC1Q8IVP5 155 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 ARFGAP1Q8N6T3 406 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 TMEM174Q8WUU8 243 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 HES7Q9BYE0 225 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.53
SMC4-202ENST00000357388 DNAJC25-GNG10A0A024R161 153 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 OR2M5A3KFT3 312 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 SH2D7A6NKC9 451 aaPredicted RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 OR7C2O60412 319 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 CNIH1O95406 144 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 ZNF17P17021 662 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 DIO1P49895 249 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 GPM6AP51674 278 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 EDDM3BP56851 147 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 CSNK1G2P78368 415 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 C1orf140Q5VVS0 124 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 DRAM2Q6UX65 266 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 CCDC190Q86UF4 302 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 STPG2Q8N412 459 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 SCCPDHQ8NBX0 429 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 BLNKQ8WV28 456 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 BARX1Q9HBU1 254 aaPredicted RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 TOX3O15405 576 aaPredicted RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms