RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 TM4SF19Q96DZ7 209 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 KTI12Q96EK9 354 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 SMIM10Q96HG1 83 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 INTS14Q96SY0 518 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 LPAR4Q99677 370 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 LYRM4Q9HD34 91 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 ACKR4Q9NPB9 350 aa7.42□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF736B4DX44 427 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 XKRYO14609 159 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ARPC3O15145 178 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 RENP00797 406 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 IFNA2P01563 188 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 IFNA17P01571 189 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PMP2P02689 132 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 AKR1C4P17516 323 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TFF2Q03403 129 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 C1orf61Q13536 156 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 INPP5JQ15735 1006 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 CD226Q15762 336 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TMEM244Q5VVB8 128 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR10D4PQ8NGN7 298 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PPP1R1CQ8WVI7 109 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ASB13Q8WXK3 278 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 DGAT2Q96PD7 388 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 GAL3ST4Q96RP7 486 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 KLHDC3Q9BQ90 382 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MRI1Q9BV20 369 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MFRPQ9BY79 579 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TWSG1Q9GZX9 223 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 DUSP15Q9H1R2 295 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 RIMS4Q9H426 269 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 FAM60AQ9NP50 221 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MMP26Q9NRE1 261 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 C19orf12Q9NSK7 152 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 FAM86C1Q9NVL1 165 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 UPB1Q9UBR1 384 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TRAV14DV4A0A0A6YYC5 116 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 C5orf51A6NDU8 294 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TMEM212A6NML5 194 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 FGF16O43320 207 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC35E2P0CK97 266 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ACKR3P25106 362 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MECP2P51608 486 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ATP1B3P54709 279 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TNFRSF9Q07011 255 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PJVKQ0ZLH3 352 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 DHRS2Q13268 280 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF345Q14585 488 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 C1QL3Q5VWW1 255 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 GLT8D1Q68CQ7 371 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MED25Q71SY5 747 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PRR18Q8N4B5 295 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 BCORP1Q8N888 145 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ISOC2Q96AB3 205 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TGM7Q96PF1 710 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MESP1Q9BRJ9 268 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 NMNAT2Q9BZQ4 307 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 BCO1Q9HAY6 547 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 CKLFQ9UBR5 152 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 DHDHQ9UQ10 334 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 IGKV1D-42A0A075B6H8 117 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 LOC100289279A0A1B0GTE1 492 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 H7C1Q1 480 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 EIF1AYO14602 144 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 SRPX2O60687 465 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 WNT11O96014 354 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 SFTA3P0C7M3 94 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ADH6P28332 368 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PRKXP51817 358 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TAS2R19P59542 299 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ACTBP60709 375 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ACTG1P63261 375 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 KIAA0141Q14154 515 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 EIF2B1Q14232 305 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 NR0B2Q15466 257 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ELAVL1Q15717 326 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF74Q16587 644 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 MESTQ5EB52 335 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 THEM4Q5T1C6 240 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 IL34Q6ZMJ4 242 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 KDM8Q8N371 416 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 INO80EQ8NBZ0 244 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 CLEC1AQ8NC01 280 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR51A2Q8NGJ7 313 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR10R2Q8NGX6 335 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 RNF141Q8WVD5 230 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZBTB8AQ96BR9 441 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 CTHRC1Q96CG8 243 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 CMBLQ96DG6 245 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 TAAR9Q96RI9 348 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC6A7Q99884 636 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 G6PC3Q9BUM1 346 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 GPR61Q9BZJ8 451 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 PLA2G2FQ9BZM2 168 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 SFXN1Q9H9B4 322 aa7.41□□□□□ -1.22
CDC42SE1-201ENST00000357235 UNKLQ9H9P5 680 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms