RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 VN1R2Q8NFZ6 395 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 OR5AP2Q8NGF4 316 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 CMTM3Q96MX0 182 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 KLK11Q9UBX7 282 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 LRP3O75074 770 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 PRAMEF6Q5VXH4 476 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
CHD4-201ENST00000357008 MTCH1Q9NZJ7 389 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 HOXC8P31273 242 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 LINC00303Q3SY05 128 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 LHFPL2Q6ZUX7 228 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR4F5Q8NH21 305 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 NXPE3Q969Y0 559 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR4F4Q96R69 305 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 SHARPINQ9H0F6 387 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 SSSCA1O60232 199 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 TSPAN12O95859 305 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 PRR35P0CG20 571 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 APH1AQ96BI3 265 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR51I2Q9H344 312 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 TXNIPQ9H3M7 391 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 WSB2Q9NYS7 404 aaPredicted RBP13.49□□□□□ -0.25
CHD4-201ENST00000357008 DUSP13Q9UII6 198 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 SLC22A13Q9Y226 551 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 MBP02144 154 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 PI3P19957 117 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 EDDM3AQ14507 147 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 THNSL2Q86YJ6 484 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 MAP6Q96JE9 813 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 TIMM10BQ9Y5J6 103 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 V9GYS6 101 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 GRPP07492 148 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 OR5H8P0DN80 308 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 ZP3P21754 424 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 FGF9P31371 208 aaPredicted RBP13.49□□□□□ -0.25
CHD4-201ENST00000357008 PGFP49763 221 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 UBE2G1P62253 170 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
CHD4-201ENST00000357008 GLDNQ6ZMI3 551 aaPredicted RBP13.49□□□□□ -0.25
CHD4-201ENST00000357008 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 DERL3Q96Q80 235 aa13.49□□□□□ -0.25
CHD4-201ENST00000357008 NKX6-3A6NJ46 265 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 M0R135 149 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF77Q15935 545 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 NKG7Q16617 165 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 BHLHE23Q8NDY6 225 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 CORO2AQ92828 525 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF799Q96GE5 643 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 hCG_1809904A0A1W2PP81 198 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 A0A1W2PPE2 198 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 A0A1W2PR64 198 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 A0A1W2PRV1 198 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ST8SIA1Q92185 356 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 TMEM18Q96B42 140 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 WDFY2Q96P53 400 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF251Q9BRH9 671 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 MYO9BQ13459 2157 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 CHD4Q14839 1912 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF816-ZNF321PA0A0X1KG74 233 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 EN2P19622 333 aaPredicted RBP13.48□□□□□ -0.25
CHD4-201ENST00000357008 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.255e-7■■■■■ 29.8
CHD4-201ENST00000357008 OR8B8Q15620 311 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF321PQ8N8H1 164 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 OR10P1Q8NGE3 313 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 BAHD1Q8TBE0 780 aaPredicted RBP13.48□□□□□ -0.25
CHD4-201ENST00000357008 RFPL4AA6NLU0 287 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 RFPL4AL1F8VTS6 287 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 RRADP55042 308 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 FAM185AQ8N0U4 392 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 ZNF586Q9NXT0 402 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 KCNG2Q9UJ96 466 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 CYB561P49447 251 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 DTWD2Q8NBA8 298 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 OR13D1Q8NGV5 346 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 POLDIP2Q9Y2S7 368 aa13.48□□□□□ -0.25
CHD4-201ENST00000357008 TBXA2RP21731 343 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 PBOV1Q9GZY1 135 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 RIMS4Q9H426 269 aaPredicted RBP13.47□□□□□ -0.25
CHD4-201ENST00000357008 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 OPRM1P35372 400 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 ADPRHP54922 357 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 BTLAQ7Z6A9 289 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 RPS19BP1Q86WX3 136 aaKnown RBP13.47□□□□□ -0.25
CHD4-201ENST00000357008 FER1L6-AS2Q96M78 137 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 SMIM7Q9BQ49 75 aa13.47□□□□□ -0.25
CHD4-201ENST00000357008 R3HDMLQ9H3Y0 253 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms