RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OR10R2Q8NGX6 335 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 AKR1E2Q96JD6 320 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TMPRSS5Q9H3S3 457 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 C6orf106Q9H6K1 298 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 C12orf10Q9HB07 376 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 BCL2L10Q9HD36 194 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 KDM3BQ7LBC6 1761 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 MYH6P13533 1939 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TRGV10A0A0A0MS01 117 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ZNF816-ZNF321PA0A0X1KG74 233 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ACOT8O14734 319 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SLC31A2O15432 143 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 XRCC3O43542 346 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 C1QBP02746 253 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 GUSBP08236 651 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 THBS4P35443 961 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CNN1P51911 297 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 FUT6P51993 359 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RANP62826 216 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 BAK1Q16611 211 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ZNF750Q32MQ0 723 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 NHSL2Q5HYW2 709 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ELFN2Q5R3F8 820 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 MFSD4AQ8N468 514 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 C17orf78Q8N4C9 275 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SIRT6Q8N6T7 355 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR2T6Q8NHC8 308 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PINX1Q96BK5 328 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 CDCA4Q9BXL8 241 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 FBXO34Q9NWN3 711 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 V9GYS6 101 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 DOT1LQ8TEK3 1739 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ANKUB1A6NFN9 424 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SNRPGP15A8MWD9 76 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 GPR37O15354 613 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CBR3O75828 277 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RPA2P15927 270 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR5I1Q13606 314 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PARM1Q6UWI2 310 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 DRAM2Q6UX65 266 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CDH26Q8IXH8 852 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR5M8Q8NGP6 311 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR5M1Q8NGP8 315 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SLCO4A1Q96BD0 722 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 POM121L2Q96KW2 1035 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TAAR9Q96RI9 348 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PDCD1LG2Q9BQ51 273 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PBOV1Q9GZY1 135 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 FGF22Q9HCT0 170 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PSENENQ9NZ42 101 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CLEC1BQ9P126 229 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ASH2LQ9UBL3 628 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 DBX1A6NMT0 343 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 NCBP2LA6PVI3 153 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 UMAD1C9J7I0 102 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ICOSLGO75144 302 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 LIMS3P0CW19 117 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 LIMS4P0CW20 117 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RRASP10301 218 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 KIR2DS2P43631 304 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 DSCR4P56555 118 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 AQP6Q13520 282 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 FAM53BQ14153 422 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TRMT12Q53H54 448 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 SPANXN5Q5MJ07 72 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TIGD3Q6B0B8 471 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ZNF787Q6DD87 383 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ETFRF1Q6IPR1 90 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RFLNAQ6ZTI6 216 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 MOB1BQ7L9L4 216 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR10AD1Q8NGE0 317 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR13D1Q8NGV5 346 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR2V1Q8NHB1 315 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 NT5CQ8TCD5 201 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 KISS1RQ969F8 398 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 C14orf79Q96F83 325 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CXorf58Q96LI9 332 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 NAA50Q9GZZ1 169 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 MYOZ1Q9NP98 299 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 OCIAD1Q9NX40 245 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SLC23A1Q9UHI7 598 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CCDC187A0A096LP49 1063 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 IGHV3-20A0A0C4DH32 117 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 NRG2O14511 850 aaPredicted RBP5.87□□□□□ -1.47
UPF2-201ENST00000356352 NDUFB3O43676 98 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 SSSCA1O60232 199 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 ZNF354AO60765 605 aaPredicted RBP5.87□□□□□ -1.47
UPF2-201ENST00000356352 PDGFAP04085 211 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 CRYBA1P05813 215 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 IGFBP1P08833 259 aaPredicted RBP5.87□□□□□ -1.47
UPF2-201ENST00000356352 CLDN15P56746 228 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 ACVR1Q04771 509 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 TRA2AQ13595 282 aaKnown RBP eCLIP5.87□□□□□ -1.475e-29■■■■■ 35.2
UPF2-201ENST00000356352 ANKRD33Q7Z3H0 272 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 NKAIN4Q8IVV8 208 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 FBXL14Q8N1E6 418 aa5.87□□□□□ -1.47
UPF2-201ENST00000356352 GPR84Q9NQS5 396 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms