RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TAF8Q7Z7C8 310 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 PAQR4Q8N4S7 273 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 OR13C9Q8NGT0 318 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SOX7Q9BT81 388 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 EDEM2Q9BV94 578 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 UBQLN4Q9NRR5 601 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM269A0A1B0GVZ9 245 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 LINC01553A4QN01 128 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SDCBPO00560 298 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 CD80P33681 288 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ARRB1P49407 418 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 S100A10P60903 97 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 EBPQ15125 230 aaKnown RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SGCAQ16586 387 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 PARM1Q6UWI2 310 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 OOSP2Q86WS3 158 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 HOXB13Q92826 284 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 TSLPQ969D9 159 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SCARF2Q96GP6 870 aaPredicted RBP9.07□□□□□ -0.96
PTPRA-203ENST00000356147 BANF2Q9H503 90 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 ZFP57Q9NU63 452 aa9.07□□□□□ -0.96
PTPRA-203ENST00000356147 SPAG17Q6Q759 2223 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ASXL3Q9C0F0 2248 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 TRBV23-1A0A0A0MS06 115 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 IGKV1D-43A0A0B4J1Z2 117 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 A0A1B0GV50 99 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 RAB19A4D1S5 217 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 B4DGG1 531 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 SGCEO43556 437 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OPN1LWP04000 364 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 PPT1P50897 306 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 MST1LQ2TV78 715 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 AVPI1Q5T686 147 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF813Q6ZN06 617 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 C16orf47Q6ZP98 133 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-203ENST00000356147 Q6ZSR6 202 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 GALNTL5Q7Z4T8 443 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF615Q8N8J6 731 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OR13H1Q8NG92 308 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 PMM1Q92871 262 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 C8orf44Q96CB5 159 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 C14orf79Q96F83 325 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-203ENST00000356147 RHOFQ9HBH0 211 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 HHLA2Q9UM44 414 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 A0A1W2PPE3 182 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 LRP3O75074 770 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 CD74P04233 296 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 HOXB5P09067 269 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 KIR2DL1P43626 348 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OR1D4P47884 311 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 CCINQ13939 588 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF260Q3ZCT1 412 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 CDCP2Q5VXM1 449 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 CATSPERDQ86XM0 798 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF101Q8IZC7 436 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OR1M1Q8NGA1 313 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 MAP3K3Q99759 626 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 PRRT1Q99946 306 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 EMC6Q9BV81 110 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 SLC19A3Q9BZV2 496 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 LAT2Q9GZY6 243 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OR52A1Q9UKL2 312 aa9.06□□□□□ -0.96
PTPRA-203ENST00000356147 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 CLDN4O14493 209 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 KLF8O95600 359 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ADH6P28332 368 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 PPICP45877 212 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 RPL7L1Q6DKI1 246 aaKnown RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 DHRS7BQ6IAN0 325 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ARMC6Q6NXE6 501 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 RNF141Q8WVD5 230 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 BADQ92934 168 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ADAT3Q96EY9 351 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 PHYHIPLQ96FC7 376 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 CLCC1Q96S66 551 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 RSRP1Q9BUV0 290 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ACKR4Q9NPB9 350 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 MED29Q9NX70 200 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 A0A1W2PQF6 199 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 MED6O75586 246 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SNAPINO95295 136 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 TXNDC12O95881 172 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SFTPBP07988 381 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 MELTFP08582 738 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 FAM157CP0CG43 387 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ANOS1P23352 680 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 LPAR6P43657 344 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 F2RL1P55085 397 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SCAND1P57086 179 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 HHEXQ03014 270 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 PEA15Q15121 130 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 TEX30Q5JUR7 227 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms