RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 OR2M5A3KFT3 312 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR6C68A6NDL8 312 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 MBD3L4A6NDZ8 208 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 MBD3L5A6NJ08 208 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 FAM183AA6NL82 134 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 C12orf71A8MTZ7 269 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 LRRN3E7EW58 273 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PHF1O43189 567 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 TRAF3IP2O43734 574 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 GPRIN2O60269 458 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ZIC3O60481 467 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 CLPXO76031 633 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SERPINA3P01011 423 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 IGHG1P01857 330 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 TACSTD2P09758 323 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 TFPIP10646 304 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 MAGEA5P43359 124 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ETV1P50549 477 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF133P52736 654 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SLC16A1P53985 500 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 B3GALT5-AS1P59052 145 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 DYNC1I2Q13409 638 aaKnown RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR7A5Q15622 319 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SSX1Q16384 188 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PCK2Q16822 640 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 DGUOKQ16854 277 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 KLHL12Q53G59 568 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 THEM4Q5T1C6 240 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PDSS1Q5T2R2 415 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PRAMEF20Q5VT98 475 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 RAET1LQ5VY80 246 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR5M10Q6IEU7 315 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 DEGS2Q6QHC5 323 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 NHLRC1Q6VVB1 395 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PLEKHG7Q6ZR37 379 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 UEVLDQ8IX04 471 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SLC35F2Q8IXU6 374 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 MS4A15Q8N5U1 240 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 TMEM251Q8N6I4 163 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR4F15Q8NGB8 312 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR51G2Q8NGK0 314 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 LINC01560Q8TB33 94 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 RPS4Y2Q8TD47 263 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ASB10Q8WXI3 467 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 CPNE4Q96A23 557 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 INTS12Q96CB8 462 aaKnown RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 PERPQ96FX8 193 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SLC25A44Q96H78 314 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ARL5BQ96KC2 179 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 Q96M85 177 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OXGR1Q96P68 337 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR5M11Q96RB7 305 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 NMNAT3Q96T66 252 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 CCL19Q99731 98 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 KLHDC3Q9BQ90 382 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 NAA11Q9BSU3 229 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-201ENST00000355766 HCAR1Q9BXC0 346 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR11A1Q9GZK7 315 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 OR51V1Q9H2C8 321 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 WDR76Q9H967 626 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 ACKR4Q9NPB9 350 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 KLHL9Q9P2J3 617 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 C11orf21Q9P2W6 132 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 B3GAT1Q9P2W7 334 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 SPRR3Q9UBC9 169 aa6.1□□□□□ -1.43
VPS13A-201ENST00000355766 IGLV1-36A0A0B4J1U3 117 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 TRDV1A0A1B0GX56 115 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1W2PPW3 197 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SLC22A23A1A5C7 686 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ANKRD61A6NGH8 418 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 OR6C65A6NJZ3 312 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF670-ZNF695F2Z2N8 137 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SULT2B1O00204 365 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 PLPP2O43688 288 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 EFNA2O43921 213 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF254O75437 659 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 AQP8O94778 261 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ACTL6AO96019 429 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 IL1AP01583 271 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 HSMCR30P0CW71 290 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 PTNP21246 168 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 AHCYP23526 432 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 CEACAM8P31997 349 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SOX6P35712 828 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ACVR1BP36896 505 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 CDKN2AP42771 156 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ROR2Q01974 943 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 POU3F1Q03052 451 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ROM1Q03395 351 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 HIST3H3Q16695 136 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ABLIM2Q6H8Q1 611 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF544Q6NX49 715 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 RPL22L1Q6P5R6 122 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SLC35D2Q76EJ3 337 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SHFQ7M4L6 423 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 FAM220AQ7Z4H9 259 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 BCDIN3DQ7Z5W3 292 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ADGRE4PQ86SQ3 457 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 CROCCP3Q8IVE0 287 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms