RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 VENTXO95231 258 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 RAC2P15153 192 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ADRA2CP18825 462 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 CALB2P22676 271 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 SRP14P37108 136 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 PMELP40967 661 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 CRMP1Q14194 572 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ZMYND11Q15326 602 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 OR2T5Q6IEZ7 315 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ARL9Q6T311 187 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 UNQ6126/PRO20091Q6UXV3 157 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 DHFR2Q86XF0 187 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ADGRG5Q8IZF4 528 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ZNF283Q8N7M2 679 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ZNF511Q8NB15 262 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 BHLHE23Q8NDY6 225 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 GJC3Q8NFK1 279 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 OR2T29Q8NH02 315 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 OR2V2Q96R30 315 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 C1QTNF5Q9BXJ0 243 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 MAGIXQ9H6Y5 334 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 TMEM106BQ9NUM4 274 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 UBAP1Q9NZ09 502 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 CGGBP1Q9UFW8 167 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 NPTNQ9Y639 398 aa14.09□□□□□ -0.15
PDLIM7-201ENST00000355572 ISPDA4D126 451 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 F5H5K5 113 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 IDH3BO43837 385 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 KRT36O76013 467 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 HLA-DPB1P04440 258 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 LIPAP38571 399 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 MMP16P51512 607 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 LCN2P80188 198 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 SNAI3Q3KNW1 292 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 FAM201AQ5SY85 155 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 ACSM5Q6NUN0 579 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 FAHD2BQ6P2I3 314 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 HS3ST5Q8IZT8 346 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 LNX2Q8N448 690 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 IQCF1Q8N6M8 205 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 OR8G5Q8NG78 346 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 RAB1CQ92928 201 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 APOBEC3DQ96AK3 386 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 FAHD2AQ96GK7 314 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 PITX2Q99697 317 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 GAL3ST1Q99999 423 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 RBM4Q9BWF3 364 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 TSSK6Q9BXA6 273 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 NMNAT2Q9BZQ4 307 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 EGLN1Q9GZT9 426 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 MED20Q9H944 212 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 MMP26Q9NRE1 261 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 TBC1D23Q9NUY8 699 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 OPN4Q9UHM6 478 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 COMMD3-BMI1R4GMX3 469 aa14.08□□□□□ -0.16
PDLIM7-201ENST00000355572 TRAV20A0A0B4J274 112 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 IQCF6A8MYZ5 107 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 F5H5P2 479 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 PNPP00491 289 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 HLA-DQA2P01906 255 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 SBK2P0C263 348 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 IFNGR2P38484 337 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 TRAP1Q12931 704 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 GK2Q14410 553 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 MICAQ29983 383 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 LINC01590Q5TEZ4 76 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 PGM2L1Q6PCE3 622 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 MEGF10Q96KG7 1140 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 DIRC2Q96SL1 478 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 ATF6BQ99941 703 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 SLC30A2Q9BRI3 323 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 REPIN1Q9BWE0 567 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 GCM1Q9NP62 436 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 IL19Q9UHD0 177 aa14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 SAMHD1Q9Y3Z3 626 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-201ENST00000355572 A0A1B0GWJ7 208 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 TRAPPC2LH3BP13 241 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 CYB5R3P00387 301 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 RGS6P49758 472 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 MNAT1P51948 309 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 MAB21L1Q13394 359 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 ZMAT1Q5H9K5 638 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 ATG16L2Q8NAA4 619 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 PROKR2Q8NFJ6 384 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 SEMA6DQ8NFY4 1073 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 OR52L1Q8NGH7 329 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 OR2AE1Q8NHA4 323 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 CANT1Q8WVQ1 401 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 DVL3Q92997 716 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 SLC7A6OSQ96CW6 309 aaPredicted RBP14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 RAB39BQ96DA2 213 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 ASB9Q96DX5 294 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 TIMD4Q96H15 378 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 THTPAQ9BU02 230 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 DGCR6LQ9BY27 220 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 MUC13Q9H3R2 512 aa14.06□□□□□ -0.16
PDLIM7-201ENST00000355572 FAM183AA6NL82 134 aa14.05□□□□□ -0.16
PDLIM7-201ENST00000355572 F5H0A9 414 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-201ENST00000355572 TMEM178BH3BS89 294 aa14.05□□□□□ -0.16
PDLIM7-201ENST00000355572 J3QW42 95 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms