RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TMEM91Q6ZNR0 172 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 PRSS41Q7RTY9 318 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 LRRC18Q8N456 261 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 TSLPQ969D9 159 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 CSAG2Q9Y5P2 127 aa11.14□□□□□ -0.63
COLCA1-201ENST00000355430 ACTL6BO94805 426 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PEA15Q15121 130 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 OR1C1Q15619 314 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 GLIPR1L1Q6UWM5 242 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 WDR88Q6ZMY6 472 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ANGPTL5Q86XS5 388 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF695Q8IW36 515 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 FGF11Q92914 225 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 COX14Q96I36 57 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 GHRLQ9UBU3 117 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ARPC4-TTLL3A0A0A6YYG9 625 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 MT-ATP6P00846 226 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 IFNA17P01571 189 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 LIMS1P48059 325 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 NHLRC1Q6VVB1 395 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 GRINAQ7Z429 371 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 MDGA2Q7Z553 956 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PRSS42Q7Z5A4 293 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 VASH2Q86V25 355 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 KCNG3Q8TAE7 436 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 SLAMF9Q96A28 289 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PIGMQ9H3S5 423 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PSME4Q14997 1843 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ICOSLGO75144 302 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF254O75437 659 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 OR2F2O95006 317 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 EPHA1P21709 976 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PPICP45877 212 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 OR2F1Q13607 317 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF674Q2M3X9 581 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 AKR1C8PQ5T2L2 129 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 CORO6Q6QEF8 472 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 FAM71CQ8NEG0 241 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 HSD17B8Q92506 261 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PFDN5Q99471 154 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 JAM3Q9BX67 310 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 BANF2Q9H503 90 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1W2PR64 198 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 OR6C65A6NJZ3 312 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 NDUFB6O95139 128 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 IFNA2P01563 188 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 SLC2A1P11166 492 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZP3P21754 424 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 BLVRBP30043 206 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-201ENST00000355430 SNRPNP63162 240 aaKnown RBP11.13□□□□□ -0.63
COLCA1-201ENST00000355430 DUSP2Q05923 314 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ACSM1Q08AH1 577 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 PLGLAQ15195 96 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 OR2A2Q6IF42 318 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF813Q6ZN06 617 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
COLCA1-201ENST00000355430 LRRC30A6NM36 301 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 C21orf140B9A014 251 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 BHLHE40O14503 412 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 CTSVO60911 334 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 VAMP5O95183 116 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 FTH1P19P0C7X4 201 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 CHATP28329 748 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 PRAMEF27A3QJZ7 478 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 TXNL1O43396 289 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 TNFSF12O43508 249 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 ZFPL1O95159 310 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 IL5P05113 134 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 SNTB1Q13884 538 aaKnown RBP11.12□□□□□ -0.63
COLCA1-201ENST00000355430 FAM173AQ9BQD7 235 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
COLCA1-201ENST00000355430 OR5V1Q9UGF6 321 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 OR6C68A6NDL8 312 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 SGCEO43556 437 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 OR2J2O76002 312 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 ID4P47928 161 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 DMKNQ6E0U4 476 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-201ENST00000355430 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF610Q8N9Z0 462 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 OR11A1Q9GZK7 315 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-201ENST00000355430 C1orf123Q9NWV4 160 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 A0A087WUJ7 227 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1B0GTH9 108 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 A0A1W2PPV9 198 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
COLCA1-201ENST00000355430 AVPI1Q5T686 147 aa11.12□□□□□ -0.63
COLCA1-201ENST00000355430 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms