RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF224Q9NZL3 707 aa9.57□□□□□ -0.88
RTN3-204ENST00000354497 MYEF2Q9P2K5 600 aaKnown RBP9.57□□□□□ -0.88
RTN3-204ENST00000354497 ABCD2Q9UBJ2 740 aa9.57□□□□□ -0.88
RTN3-204ENST00000354497 DNAJB9Q9UBS3 223 aa9.57□□□□□ -0.88
RTN3-204ENST00000354497 DUSP13Q9UII6 198 aa9.57□□□□□ -0.88
RTN3-204ENST00000354497 ZNF503-AS2A6NEH8 195 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 LIPT2A6NK58 231 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 POM121CA8CG34 1229 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 G3V2L1 256 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PLIN3O60664 434 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CRTAPO75718 401 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 HTR1AP08908 422 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CLEC2LP0C7M8 214 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 OR12D1P0DN82 309 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CD79AP11912 226 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 RAC2P15153 192 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 RAB4AP20338 218 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CXCR1P25024 350 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 MAPK1P28482 360 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 NUP62P37198 522 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 POU3F4P49335 361 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 EVX1P49640 407 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 VEGFCP49767 419 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CSNK2BP67870 215 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 KCNJ10P78508 379 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 POU3F1Q03052 451 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 SGCAQ16586 387 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 NKPD1Q17RQ9 610 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 MICBQ29980 383 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PRAMEF8Q5VWM4 474 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PRAMEF7Q5VXH5 474 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 NXNL2Q5VZ03 156 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 LRFN4Q6PJG9 635 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 OR1M1Q8NGA1 313 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 NDNFQ8TB73 568 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 XAGE5Q8WWM1 108 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CYGBQ8WWM9 190 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 RCN3Q96D15 328 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 WDFY2Q96P53 400 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 ALX4Q9H161 411 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 TUBB1Q9H4B7 451 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 DUSP21Q9H596 190 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 RANBP3Q9H6Z4 567 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 EXOSC3Q9NQT5 275 aaKnown RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 USE1Q9NZ43 259 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 TBC1D24Q9ULP9 559 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 BAIAP2Q9UQB8 552 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 A8MXK9 166 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 ZNF432O94892 652 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CHRM4P08173 479 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 SPI1P17947 270 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 PCGF2P35227 344 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 RAD52P43351 418 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 MAGEB1P43366 347 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 ATP4BP51164 291 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 ALDH3A2P51648 485 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 MAP2K6P52564 334 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CLDN17P56750 224 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 HBA1P69905 142 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 LCN2P80188 198 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PTGR1Q14914 329 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 DPY19L1Q2PZI1 675 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 SPANXN2Q5MJ10 180 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PYHIN1Q6K0P9 492 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 TNFAIP8L2Q6P589 184 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 LEG1Q6P5S2 330 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PGAP1Q75T13 922 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 BTN2A1Q7KYR7 527 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 GPR137CQ8N3F9 429 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 KRTCAP2Q8N6L1 136 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 NKAIN3Q8N8D7 197 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 SLC37A3Q8NCC5 494 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 CDADC1Q9BWV3 514 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 ZMAT3Q9HA38 289 aaKnown RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 OPN4Q9UHM6 478 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 PURGQ9UJV8 347 aaKnown RBP9.56□□□□□ -0.88
RTN3-204ENST00000354497 EMCNQ9ULC0 261 aa9.56□□□□□ -0.88
RTN3-204ENST00000354497 hCG_1807616A0A1W2PRN6 198 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 BBIP1A8MTZ0 92 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 H7C2Y5 167 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 SLC43A1O75387 559 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 RP2O75695 350 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 PTBP3O95758 552 aaKnown RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 IGHV2-70P01814 119 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 HLA-HP01893 362 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 FBP1P09467 338 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 KITP10721 976 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 C4BPBP20851 252 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 OMGP23515 440 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 RFX2P48378 723 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 PIGFQ07326 219 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 FGL1Q08830 312 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms