RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 RCBTB1Q8NDN9 531 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 OR52R1Q8NGF1 315 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 LCN9Q8WX39 176 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 LRFN5Q96NI6 719 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 NMES1Q9C002 83 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MYOZ1Q9NP98 299 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 DUSP22Q9NRW4 184 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MEMO1Q9Y316 297 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MANSC4A6NHS7 340 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ARPC3O15145 178 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 PPIHO43447 177 aaKnown RBP6.86□□□□□ -1.31
BRCA1-201ENST00000352993 FGF17O60258 216 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 OR3A2P47893 321 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SULT1A2P50226 295 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 CDK3Q00526 305 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 FHL1Q13642 323 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 RUNX2Q13950 521 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 PNLIPRP3Q17RR3 467 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 UNQ6494/PRO21346Q6UXR6 183 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 COX15Q7KZN9 410 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 RD3Q7Z3Z2 195 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 KDM8Q8N371 416 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SUMF2Q8NBJ7 301 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 OR10G6Q8NH81 332 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 PDE7BQ9NP56 450 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 SLC17A5Q9NRA2 495 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 PARPBPQ9NWS1 579 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 ZDHHC8Q9ULC8 765 aa6.86□□□□□ -1.31
BRCA1-201ENST00000352993 KIF26BQ2KJY2 2108 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 STMND1H3BQB6 276 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SOX1O00570 391 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TGM5O43548 720 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PRKNO60260 465 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FGF19O95750 216 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 F10P00742 488 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CSTBP04080 98 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 C8AP07357 584 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CD37P11049 281 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ERGP11308 486 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ALOX5APP20292 161 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 RPL12P30050 165 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ACAA2P42765 397 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FHITP49789 147 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ARFRP1Q13795 201 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FAM53BQ14153 422 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PDGFRLQ15198 375 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TOMM34Q15785 309 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF684Q5T5D7 378 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FCRL6Q6DN72 434 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 BTNL8Q6UX41 500 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TCEAL8Q8IYN2 117 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 NAXEQ8NCW5 288 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MCHR2Q969V1 340 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 RBM18Q96H35 190 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 OR10C1Q96KK4 312 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FAM212BQ9NTI7 297 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 DNAJB12Q9NXW2 375 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 FBXL17Q9UF56 701 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 GDF2Q9UK05 429 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 B9D1Q9UPM9 204 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TICRRQ7Z2Z1 1910 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CYTIPO60759 359 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 C1QL1O75973 258 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 IL2RAP01589 272 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CT62P0C5K7 136 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 NR2C1P13056 603 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 HLA-GP17693 338 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SERPINA2P20848 420 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 S1PR1P21453 382 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TAGLN2P37802 199 aaKnown RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 NFATC4Q14934 902 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 IAH1Q2TAA2 248 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM128Q5BJH2 165 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 GFI1BQ5VTD9 330 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CLEC18BQ6UXF7 455 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM184AQ6ZMB5 413 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CDC20BQ86Y33 519 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF610Q8N9Z0 462 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MFSD9Q8NBP5 474 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MR1Q95460 341 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CPNE4Q96A23 557 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MISP3Q96FF7 219 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 MOGAT1Q96PD6 335 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CHST5Q9GZS9 411 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 NELFAQ9H3P2 528 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PARP11Q9NR21 331 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 POLE3Q9NRF9 147 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 CENPMQ9NSP4 180 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 PISDQ9UG56 409 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 BRCA2P51587 3418 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 HEATR5AQ86XA9 2040 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 A6NJ64 397 aa6.85□□□□□ -1.31
BRCA1-201ENST00000352993 METTL12A8MUP2 240 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms