RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 OR52N5Q8NH56 324 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 OR6X1Q8NH79 312 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 FAM57AQ8TBR7 257 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 TRMT10AQ8TBZ6 339 aaKnown RBP7.24□□□□□ -1.25
CD44-205ENST00000352818 GPR148Q8TDV2 347 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 TXNDC15Q96J42 360 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 OXGR1Q96P68 337 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 MRPL13Q9BYD1 178 aaKnown RBP7.24□□□□□ -1.25
CD44-205ENST00000352818 SLC22A4Q9H015 551 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 CDCP1Q9H5V8 836 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 NOX4Q9NPH5 578 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 TIGARQ9NQ88 270 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 HPF1Q9NWY4 346 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 RHBDL2Q9NX52 303 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 FRRS1LQ9P0K9 344 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 EXTL2Q9UBQ6 330 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 TEKT2Q9UIF3 430 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 IKZF2Q9UKS7 526 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 SPATA2Q9UM82 520 aa7.24□□□□□ -1.25
CD44-205ENST00000352818 KIAA1549Q9HCM3 1950 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 MBD3L4A6NDZ8 208 aaPredicted RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 MBD3L5A6NJ08 208 aaPredicted RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 FAM25AB3EWG3 89 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 FAM25CB3EWG5 89 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 FAM25GB3EWG6 89 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SHISA8B8ZZ34 492 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 H3BML4 177 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SRSF10O75494 262 aaKnown RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 CBR3O75828 277 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 TPPPO94811 219 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 RPP14O95059 124 aaKnown RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 CNOT4O95628 575 aaKnown RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 IGHG1P01857 330 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 HLA-DQA2P01906 255 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 HNRNPCP07910 306 aaKnown RBP eCLIP7.23□□□□□ -1.25
CD44-205ENST00000352818 PGA4P0DJD7 388 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 PGA3P0DJD8 388 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SLC2A2P11168 524 aaPredicted RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 SPNP16150 400 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 ATF1P18846 271 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 DPP4P27487 766 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SRD5A2P31213 254 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 DCTDP32321 178 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 KIR3DL2P43630 455 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 RFX2P48378 723 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 ZNF133P52736 654 aaPredicted RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 RIDAP52758 137 aaKnown RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 OR10A3P58181 314 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 IL18Q14116 193 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 POU4F3Q15319 338 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 KCNMB1Q16558 191 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 MEP1BQ16820 701 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SLC25A35Q3KQZ1 300 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 UBE2NLQ5JXB2 153 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 PRAMEF20Q5VT98 475 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 TRIQKQ629K1 86 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 TIGD3Q6B0B8 471 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 PYHIN1Q6K0P9 492 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 LRRN1Q6UXK5 716 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 IL20RBQ6UXL0 311 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 TMPPEQ6ZT21 453 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 RHOUQ7L0Q8 258 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 GLB1L2Q8IW92 636 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 UEVLDQ8IX04 471 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 Q8N402 240 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 MDS2Q8NDY4 140 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 OR1J4Q8NGS1 313 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 FAM222BQ8WU58 562 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 THEM6Q8WUY1 208 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 NSMAFQ92636 917 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 HTRA1Q92743 480 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SIGLEC12Q96PQ1 595 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 AMELYQ99218 206 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 ABHD6Q9BV23 337 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SLITRK2Q9H156 845 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 SLCO1C1Q9NYB5 712 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 COA3Q9Y2R0 106 aaPredicted RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 MRPS18CQ9Y3D5 142 aaKnown RBP7.23□□□□□ -1.25
CD44-205ENST00000352818 ETV7Q9Y603 341 aa7.23□□□□□ -1.25
CD44-205ENST00000352818 ACOD1A6NK06 481 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 GJE1A6NN92 205 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 IFITM5A6NNB3 132 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 PSMD9O00233 223 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 CTDSPLO15194 276 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 PLA2G10O15496 165 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 EIF1BO60739 113 aaKnown RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 UBL3O95164 117 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 VAMP5O95183 116 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 GPANK1O95872 356 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 P04436 131 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 EIF4EP06730 217 aaKnown RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 SPARCP09486 303 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 FAM157CP0CG43 387 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 TRAPPC2P0DI81 140 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 TRAPPC2BP0DI82 140 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 CALCBP10092 127 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ZNF823P16415 610 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 FSTP19883 344 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 RBMXP38159 391 aaKnown RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 MNDAP41218 407 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms