RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TAS2R38P59533 333 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 S100A10P60903 97 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 DLK1P80370 383 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 FUT5Q11128 374 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ELOCQ15369 112 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 HAGHQ16775 308 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 AGTRAPQ6RW13 159 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF627Q7L945 461 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 GDF7Q7Z4P5 450 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF761Q86XN6 746 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PLPP5Q8NEB5 264 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 OR52L1Q8NGH7 329 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 C20orf141Q9NUB4 165 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 SLC13A4Q9UKG4 626 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 WDR45Q9Y484 360 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 KCNE3Q9Y6H6 103 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 TET1Q8NFU7 2136 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PLRG1O43660 514 aaKnown RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 FCMRO60667 390 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 GCGP01275 180 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 TK1P04183 234 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 CD46P15529 392 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 MAKP20794 623 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 GABRR1P24046 479 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 HOXC12P31275 282 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 DIO1P49895 249 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 NOVA1P51513 510 aaKnown RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 SGSHP51688 502 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ACTBP60709 375 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ACTG1P63261 375 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PRAMEF8Q5VWM4 474 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PRAMEF7Q5VXH5 474 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 MED27Q6P2C8 311 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PFN4Q8NHR9 129 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 RSC1A1Q92681 617 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 AQP10Q96PS8 301 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 LMF1Q96S06 567 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 MRPL22Q9NWU5 206 aaKnown RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 SRPK3Q9UPE1 567 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF281Q9Y2X9 895 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 POLR3KQ9Y2Y1 108 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 V9GYS6 101 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 TSPAN11A1L157 253 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 UNC119BA6NIH7 251 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 OR4C45A6NMZ5 311 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 AQP7O14520 342 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ABLIM3O94929 683 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 AGR2O95994 175 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 CYB5AP00167 134 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 CSTBP04080 98 aaKnown RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 SLC2A5P22732 501 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 GDI1P31150 447 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PBX2P40425 430 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PPM1FP49593 454 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 RPS24P62847 133 aaKnown RBP9.57□□□□□ -0.88
CAPN3-203ENST00000349748 RAB32Q13637 225 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 PRSS54Q6PEW0 395 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 RFLNAQ6ZTI6 216 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF740Q8NDX6 193 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 NUDT10Q8NFP7 164 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 OR9A4Q8NGU2 314 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 OR13D1Q8NGV5 346 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 CMC2Q9NRP2 79 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 SLC7A7Q9UM01 511 aa9.57□□□□□ -0.88
CAPN3-203ENST00000349748 CHD3Q12873 2000 aaKnown RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 PLXNA3P51805 1871 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TRAV27A0A087WT01 109 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 LNP1A1A4G5 178 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 C20orf202A1L168 122 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 RAB27BO00194 218 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SLC16A8O95907 504 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SCGB1D1O95968 90 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 IL2RAP01589 272 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 FGF5P12034 268 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 PPP1CCP36873 323 aaKnown RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ACTC1P68032 377 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ACTA1P68133 377 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ADAM8P78325 824 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ARF5P84085 180 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 CLLU1OSQ5K130 101 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 RIPPLY2Q5TAB7 128 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 RPUSD3Q6P087 351 aaKnown RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 MED25Q71SY5 747 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM150AQ86TG1 271 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM173Q86WV6 379 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 OR51A7Q8NH64 312 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 OR5P2Q8WZ92 322 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SLC35G5Q96KT7 338 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SUSD3Q96L08 255 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 Q96M85 177 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 NMES1Q9C002 83 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 DMRT3Q9NQL9 472 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 MARCH2Q9P0N8 246 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms