RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 RAB27BO00194 218 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 SULT1C2O00338 296 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF735P0CB33 412 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 CCL4P13236 92 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 BDKRB2P30411 391 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 P2RX3P56373 397 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 TAS2R19P59542 299 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ACTBP60709 375 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 RAP2BP61225 183 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ACTG1P63261 375 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 QRFPP83859 136 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 KLHL24Q6TFL4 600 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 RTN4RL2Q86UN3 420 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 FAM109AQ8N4B1 249 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 NKAIN3Q8N8D7 197 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 TMEM229BQ8NBD8 167 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 OR4S1Q8NGB4 309 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 OR4K17Q8NGC6 315 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 OR51E1Q8TCB6 317 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 NAT6Q93015 286 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 B3GNT4Q9C0J1 378 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 SLC5A6Q9Y289 635 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 LOC102723996A0A087X1L8 192 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 RER1O15258 196 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 RAB3DO95716 219 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 PRKXP51817 358 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF529Q6P280 563 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 OR2AK2Q8NG84 335 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 FAM46BQ96A09 425 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ELMOD3Q96FG2 381 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 EXO5Q9H790 373 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 PNRC2Q9NPJ4 139 aaKnown RBP13.69□□□□□ -0.22
UPF3B-202ENST00000345865 ASH2LQ9UBL3 628 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 OPN4Q9UHM6 478 aa13.69□□□□□ -0.22
UPF3B-202ENST00000345865 IGHV1-45A0A0A0MS14 117 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
UPF3B-202ENST00000345865 TDGF1P13385 188 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 HSD11B1P28845 292 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 HIST3H3Q16695 136 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 ESCO2Q56NI9 601 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 IDO2Q6ZQW0 420 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 OR1M1Q8NGA1 313 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 OR13C9Q8NGT0 318 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 OR6X1Q8NH79 312 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 EDAQ92838 391 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 PTX4Q96A99 478 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 OXGR1Q96P68 337 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 SPACA5Q96QH8 159 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
UPF3B-202ENST00000345865 POFUT1Q9H488 388 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 WDR54Q9H977 334 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 CCDC163A0A0D9SF12 145 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 M0R233 179 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 QDPRP09417 244 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF35P13682 527 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 ABOP16442 354 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF43P17038 809 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 HOXA6P31267 233 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 OPCMLQ14982 345 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 SLC22A6Q4U2R8 563 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 AQP3Q92482 292 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 PNPLA2Q96AD5 504 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 FOXRED1Q96CU9 486 aaPredicted RBP13.68□□□□□ -0.22
UPF3B-202ENST00000345865 IMMP1LQ96LU5 166 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 TMEM138Q9NPI0 162 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 POLR1DQ9Y2S0 133 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
UPF3B-202ENST00000345865 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 AQP7P3A6NL99 342 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 MCRIP1C9JLW8 97 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF878C9JN71 531 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 D6RAR5 112 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 GOSR2O14653 212 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 AMY2AP04746 511 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 MELTFP08582 738 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 CCL3P10147 92 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 COX6A1P12074 109 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF17P17021 662 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 IL11RAQ14626 422 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 OR8B12Q8NGG6 310 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 CYYR1Q96J86 154 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 GNRHR2Q96P88 292 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 SLC6A7Q99884 636 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
UPF3B-202ENST00000345865 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 A0A0A6YYH2 397 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 A6NJ64 397 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 E9PLN8 166 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 G3V3Y1 287 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 SULT2B1O00204 365 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 CYB5AP00167 134 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 CD74P04233 296 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 RAB6AP20340 208 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 NFYAP23511 347 aaPredicted RBP13.67□□□□□ -0.22
UPF3B-202ENST00000345865 GABREP78334 506 aa13.67□□□□□ -0.22
UPF3B-202ENST00000345865 ZNF239Q16600 458 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms