RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SNRPD1P62314 119 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ISXQ2M1V0 245 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TTLL10Q6ZVT0 673 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 LRRTM4Q86VH4 590 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM183AQ8IXX5 376 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 LMNTD1Q8N9Z9 388 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR2AP1Q8NGE2 309 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR51D1Q8NGF3 324 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR14K1Q8NGZ2 314 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CASTOR1Q8WTX7 329 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 C2orf15Q8WU43 125 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CDS1Q92903 461 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PTX4Q96A99 478 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MVB12AQ96EY5 273 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SHDQ96IW2 340 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ADGRG7Q96K78 797 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 C5orf34Q96MH7 638 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PRSS27Q9BQR3 290 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TTTY10Q9BZA0 68 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 GAL3ST2Q9H3Q3 398 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR14J1Q9UGF5 321 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 DKKL1Q9UK85 242 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR52A1Q9UKL2 312 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 FARSAQ9Y285 508 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 LOC100509620A0A075B734 347 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 HSPA12AO43301 675 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 MAS1P04201 325 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 IFNA6P05013 189 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 F13BP05160 661 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 SFTPBP07988 381 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CLUP10909 449 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CAMLGP49069 296 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 GNG10P50151 68 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 POLR2LP62875 67 aaKnown RBP7.32□□□□□ -1.24
ATG4A-201ENST00000343524 SLC35A1P78382 337 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ELOBQ15370 118 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 IQCJQ1A5X6 159 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CCSMST1Q4G0I0 132 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM128Q5BJH2 165 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 PRRT3Q5FWE3 981 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CYB5R2Q6BCY4 276 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 RPL7L1Q6DKI1 246 aaKnown RBP7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ABLIM2Q6H8Q1 611 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF836Q6ZNA1 936 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ADGRE4PQ86SQ3 457 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 C17orf64Q86WR6 236 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 C9orf40Q8IXQ3 194 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ARL14EPQ8N8R7 260 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CYB561A3Q8NBI2 242 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 OR4K15Q8NH41 348 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ADAMTS15Q8TE58 950 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF689Q96CS4 500 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-201ENST00000343524 NTNG2Q96CW9 530 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 RCC1LQ96I51 464 aaKnown RBP7.32□□□□□ -1.24
ATG4A-201ENST00000343524 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM208Q9BTX3 173 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 PCBD2Q9H0N5 130 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 PDE7BQ9NP56 450 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 ADAP2Q9NPF8 381 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 CKLFQ9UBR5 152 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 AMDHD2Q9Y303 409 aa7.32□□□□□ -1.24
ATG4A-201ENST00000343524 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 K7EPK0 472 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TP53I11O14683 189 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ITGB1BP1O14713 200 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TSPAN6O43657 245 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 NDUFB2O95178 105 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GYPBP06028 91 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 DBIP07108 87 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GALTP07902 379 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SNRPCP09234 159 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 LAMP2P13473 410 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 C6P13671 934 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 CSNK2A2P19784 350 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF616Q08AN1 781 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 DUSP8Q13202 625 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 EBPQ15125 230 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 HIKESHIQ53FT3 197 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 STPG1Q5TH74 334 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF627Q7L945 461 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 HMGN2P46Q86SG4 172 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 GKN2Q86XP6 184 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 FAM129CQ86XR2 697 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 FAM71E2Q8N5Q1 922 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF676Q8N7Q3 588 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR52E2Q8NGJ4 325 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 PFN4Q8NHR9 129 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 FGF13Q92913 245 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM106AQ96A25 262 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 C2orf50Q96LR7 162 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF385AQ96PM9 386 aaKnown RBP7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SLC6A7Q99884 636 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 OR2AG1Q9H205 316 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 RXFP3Q9NSD7 469 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 SUSD2Q9UGT4 822 aa7.31□□□□□ -1.24
ATG4A-201ENST00000343524 RALYQ9UKM9 306 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms