RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 INSM2Q96T92 566 aaPredicted RBP16.64■□□□□ 0.26
SMPD1-201ENST00000342245 TRIM2Q9C040 744 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 PLAGL1Q9UM63 463 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 KCNK6Q9Y257 313 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 TMEM14AQ9Y6G1 99 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 A0A087WV48 116 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 MEGF11A6BM72 1044 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 PHOX2AO14813 284 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 DLEU1O43261 78 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 CRTAPO75718 401 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-201ENST00000342245 METTL15P1P0C7V9 234 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 ZNF25P17030 456 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-201ENST00000342245 ZIC1Q15915 447 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 DUSP5Q16690 384 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 FDX2Q6P4F2 183 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 MED25Q71SY5 747 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 GRASPQ7Z6J2 395 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-201ENST00000342245 TRAPPC6BQ86SZ2 158 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 CDC20BQ86Y33 519 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 OR2L2Q8NH16 312 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 GRHL3Q8TE85 626 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 POM121Q96HA1 1249 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 ARV1Q9H2C2 271 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 KCNK15Q9H427 330 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 PLA2G2EQ9NZK7 142 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 IKZF2Q9UKS7 526 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 MMP24Q9Y5R2 645 aa16.64■□□□□ 0.25
SMPD1-201ENST00000342245 GABRR1P24046 479 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 CD200P41217 278 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 CSNK1G2P78368 415 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 GFI1BQ5VTD9 330 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 POC1AQ8NBT0 407 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 KREMEN2Q8NCW0 462 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 FAM174AQ8TBP5 190 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 SLC25A31Q9H0C2 315 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 NELFAQ9H3P2 528 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 PRDM7Q9NQW5 492 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 LAMP5Q9UJQ1 280 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 PITPNC1Q9UKF7 332 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 CENPVL1A0A0U1RR11 272 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 LDLRAD4O15165 306 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 GRM6O15303 877 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 SCGNO76038 276 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 THBS4P35443 961 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 CAMLGP49069 296 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 RAB32Q13637 225 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 ZNF664Q8N3J9 261 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 OR5AR1Q8NGP9 310 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 C4orf45Q96LM5 186 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 MKKSQ9NPJ1 570 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-201ENST00000342245 TCFL5Q9UL49 500 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 GPR34Q9UPC5 381 aa16.63■□□□□ 0.25
SMPD1-201ENST00000342245 A0A1B0GWA3 101 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 K7EPK0 472 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 M0R143 59 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 CKBP12277 381 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 EDN3P14138 238 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 RPL12P30050 165 aaKnown RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 SLC35A1P78382 337 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 ZNF616Q08AN1 781 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 IL15RAQ13261 267 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 CLN3Q13286 438 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 SSPNQ14714 243 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 SLC24A5Q71RS6 500 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 MRPL52Q86TS9 123 aaKnown RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 FAM71E2Q8N5Q1 922 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 Q8WTZ3 238 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 MS4A6EQ96DS6 147 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 TMEM106CQ9BVX2 250 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 NUDT9Q9BW91 350 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 CRLF2Q9HC73 371 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 PUS1Q9Y606 427 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 KIAA1549LQ6ZVL6 1849 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 A0A087WZY1 265 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 ERI3O43414 337 aaKnown RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 GCGP01275 180 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 MSX1P28360 303 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 CCKBRP32239 447 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 LANCL3Q6ZV70 420 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 OR10AC1Q8NH08 325 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 HIST1H2BLQ99880 126 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 KXD1Q9BQD3 176 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 ATG101Q9BSB4 218 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 METTL8Q9H825 291 aaKnown RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
SMPD1-201ENST00000342245 SLCO1B1Q9Y6L6 691 aa16.62■□□□□ 0.25
SMPD1-201ENST00000342245 M0QZK8 103 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 LEFTY2O00292 366 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 GGCTO75223 188 aaKnown RBP16.61■□□□□ 0.25
SMPD1-201ENST00000342245 PRPS1P60891 318 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 HIKESHIQ53FT3 197 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 DCST2Q5T1A1 773 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 TPGS2Q68CL5 300 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.61■□□□□ 0.25
SMPD1-201ENST00000342245 C5orf24Q7Z6I8 188 aa16.61■□□□□ 0.25
SMPD1-201ENST00000342245 LRRC25Q8N386 305 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-201ENST00000342245 OR51A4Q8NGJ6 313 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms