RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 IGHV2-70DA0A0C4DH43 119 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 NME4O00746 187 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 IMPA2O14732 288 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 TXNDC12O95881 172 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 H2AFXP16104 143 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 ZNF26P17031 533 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 FPR3P25089 353 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 GSK3BP49841 420 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 BPIFB3P59826 476 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 SMARCD3Q6STE5 483 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 HACD2Q6Y1H2 254 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 MOGAT3Q86VF5 341 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 JAZF1Q86VZ6 243 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 UPRTQ96BW1 309 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 UNKLQ9H9P5 680 aaKnown RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 SRA1Q9HD15 236 aaKnown RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 KIF17Q9P2E2 1029 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 CLN8Q9UBY8 286 aa10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 SAMD4AQ9UPU9 718 aaKnown RBP10.94□□□□□ -0.66
NECTIN1-203ENST00000341398 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 F5H5P2 479 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 ZNF205O95201 554 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 NOS3P29474 1203 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 OMPP47874 163 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 PITPNBP48739 271 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 ERFP50548 548 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 RAD23AP54725 363 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 HIST1H3AP68431 136 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 COX10Q12887 443 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 SLC9A3R2Q15599 337 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 KCNJ8Q15842 424 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 ZNF404Q494X3 552 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 OTPQ5XKR4 325 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 GLYATQ6IB77 296 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 LEG1Q6P5S2 330 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 C16orf87Q6PH81 154 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 PTCHD4Q6ZW05 846 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 HIST2H3AQ71DI3 136 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 BHLHE23Q8NDY6 225 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 ZNF48Q96MX3 618 aaPredicted RBP10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 PITX2Q99697 317 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 SLC22A4Q9H015 551 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 NDUFAF4Q9P032 175 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 B9D1Q9UPM9 204 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 LHFPL6Q9Y693 200 aa10.93□□□□□ -0.66
NECTIN1-203ENST00000341398 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 F5H5K5 113 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 H0YL77 283 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 GPANK1O95872 356 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 HLA-DQA2P01906 255 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 LCATP04180 440 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 CRYBA1P05813 215 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 NCK1P16333 377 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 SLC6A6P31641 620 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 RBMXP38159 391 aaKnown RBP10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 IFNGR2P38484 337 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 MDH1P40925 334 aaKnown RBP10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 GATA4P43694 442 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 NPY4RP50391 375 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 NUDT2P50583 147 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 TPTEP56180 551 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 HNRNPA0Q13151 305 aaKnown RBP10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 RFX4Q33E94 735 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 CD276Q5ZPR3 534 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 DCDC5Q6ZRR9 648 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 PGAP1Q75T13 922 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 OR52J3Q8NH60 311 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 SPRYD4Q8WW59 207 aaPredicted RBP10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 CMTM5Q96DZ9 223 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 TSSK2Q96PF2 358 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 NUDT16L1Q9BRJ7 211 aaKnown RBP10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 SLITRK2Q9H156 845 aa10.92□□□□□ -0.66
NECTIN1-203ENST00000341398 IGHV3OR16-10A0A075B7F0 116 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 PHYHO14832 338 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 ARPC3O15145 178 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 MLNRO43193 412 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 IDH3BO43837 385 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 SASH3O75995 380 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 PPP1R3DO95685 299 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 PLATP00750 562 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 LIPFP07098 398 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 PAX2Q02962 417 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 MEP1BQ16820 701 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
NECTIN1-203ENST00000341398 ZNF362Q5T0B9 420 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms