RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 B4GALT1P15291 398 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 SPOCK1Q08629 439 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 HYAL4Q2M3T9 481 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 COMMD2Q86X83 199 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 GJC3Q8NFK1 279 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 SYNPRQ8TBG9 265 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 THAP7Q9BT49 309 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 LDAHQ9H6V9 325 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 EXO5Q9H790 373 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 HLA-DQB1P01920 261 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 PATE4P0C8F1 98 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 INPP1P49441 399 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF57Q68EA5 555 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 PYHIN1Q6K0P9 492 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 FAM57BQ71RH2 274 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 FAM109AQ8N4B1 249 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 TMEM178AQ8NBL3 297 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 OR51D1Q8NGF3 324 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 OR8B12Q8NGG6 310 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 MMP28Q9H239 520 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 NUFIP1Q9UHK0 495 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 DCDC2BA2VCK2 349 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 E9PLN8 166 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 IGFBP3P17936 291 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 MRPS34P82930 218 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 RSPO4Q2I0M5 234 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 CEACAM16Q2WEN9 425 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 RHOUQ7L0Q8 258 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 TUSC5Q8IXB3 177 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 GCDHQ92947 438 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 CGGBP1Q9UFW8 167 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 STEAP1Q9UHE8 339 aa19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 NOSIPQ9Y314 301 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-203ENST00000339162 TMIGD3P0DMS9 266 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 CD300CQ08708 224 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 CCDC92Q53HC0 331 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 FAM27BQ5VT28 67 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 ABHD12BQ7Z5M8 362 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 GLCCI1Q86VQ1 547 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 ADAT3Q96EY9 351 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 NEURL2Q9BR09 285 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 PRRG4Q9BZD6 226 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 NIPAL2Q9H841 368 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 CALHM2Q9HA72 323 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF275Q9NSD4 429 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 PLEK2Q9NYT0 353 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 FOXJ3Q9UPW0 622 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 A0A1B0GTI1 187 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 TFECO14948 347 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 SYNGR4O95473 234 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 DBHP09172 617 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 CD3GP09693 182 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 CALCBP10092 127 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 GNALP38405 381 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 DGCR2P98153 550 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 SLC22A4Q9H015 551 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 TMEM38BQ9NVV0 291 aa19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 SPENQ96T58 3664 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-203ENST00000339162 ACOT7O00154 380 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 MRPL33O75394 65 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 UBL3O95164 117 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 SLC6A9P48067 706 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 SRP9P49458 86 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 CBX3Q13185 183 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 RTP5Q14D33 572 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 TSPO2Q5TGU0 170 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 OR1J2Q8NGS2 313 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 RFT1Q96AA3 541 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 ACKR4Q9NPB9 350 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 GPR84Q9NQS5 396 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 GRB2P62993 217 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 RSPO1Q2MKA7 263 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 CPT1CQ8TCG5 803 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 TRIM63Q969Q1 353 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 FAM71F1Q96KD3 344 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 GPR35Q9HC97 309 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 SPRR3Q9UBC9 169 aa19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 MCTS1Q9ULC4 181 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-203ENST00000339162 A0A1B0GVI7 797 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 ZNHIT1O43257 154 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 EFSO43281 561 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 KRT33AO76009 404 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 PTHLHP12272 177 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 FSTP19883 344 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 KIR2DL3P43628 341 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 EFNB2P52799 333 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 ELFN2Q5R3F8 820 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 C9orf135Q5VTT2 229 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 FOXB1Q99853 325 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 CAMK2AQ9UQM7 478 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 BOD1L1Q8NFC6 3051 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 ART1P52961 327 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 GLYATL3Q5SZD4 288 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 MOB1AQ9H8S9 216 aa19.7■□□□□ 0.74
PDLIM2-203ENST00000339162 FREM1Q5H8C1 2179 aa19.69■□□□□ 0.74
PDLIM2-203ENST00000339162 IGKV3D-15A0A087WSY6 115 aa19.69■□□□□ 0.74
PDLIM2-203ENST00000339162 TRGV5A0A0B4J1U4 118 aa19.69■□□□□ 0.74
PDLIM2-203ENST00000339162 LYRM1O43325 122 aa19.69■□□□□ 0.74
PDLIM2-203ENST00000339162 WISP2O76076 250 aa19.69■□□□□ 0.74
PDLIM2-203ENST00000339162 ABOP16442 354 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms