RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 GNPDA2Q8TDQ7 276 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 MEGF10Q96KG7 1140 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 DDOQ99489 341 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 PITX2Q99697 317 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 TAGLN3Q9UI15 199 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 NBEAL1Q6ZS30 2694 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 TENM1Q9UKZ4 2725 aa11.23□□□□□ -0.61
NUDCD3-201ENST00000338427 IGHV3OR16-10A0A075B7F0 116 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 FSHBP01225 129 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 LCATP04180 440 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 WNT2P09544 360 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ACSM4P0C7M7 580 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 TNFRSF1AP19438 455 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ATP6V1B2P21281 511 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 FPR3P25089 353 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 GGT2P36268 569 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 SMIM11AP58511 58 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 BTG1P62324 171 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 COX10Q12887 443 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 KRTAP27-1Q3LI81 207 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 SAMD4BQ5PRF9 694 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ZBTB46Q86UZ6 589 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 OR5L1Q8NGL2 311 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 OR8D4Q8NGM9 314 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 TAF15Q92804 592 aaKnown RBP eCLIP11.22□□□□□ -0.611e-8■■■□□ 17.5
NUDCD3-201ENST00000338427 DVL3Q92997 716 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 APOBEC3DQ96AK3 386 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 MCUR1Q96AQ8 359 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 SLCO4A1Q96BD0 722 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 MAP6Q96JE9 813 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF582Q96NG8 517 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 COQ7Q99807 217 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 CDADC1Q9BWV3 514 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 PLA2G12AQ9BZM1 189 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 IL1RAPQ9NPH3 570 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 PNRC2Q9NPJ4 139 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 VNN3Q9NY84 501 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF69Q9UC07 566 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 MAGEL2Q9UJ55 1249 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 TMCC3Q9ULS5 477 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 PPIAL4AQ9Y536 164 aa11.22□□□□□ -0.61
NUDCD3-201ENST00000338427 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 F5H0A9 414 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 J3QLI3 93 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 FOXH1O75593 365 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 TUBG1P23258 451 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 NOS3P29474 1203 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 CD80P33681 288 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 MMP16P51512 607 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 HILS1P60008 231 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 MXRA7P84157 204 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 TSPAN31Q12999 210 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 ZNF154Q13106 437 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 COLCA1Q6ZS62 124 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 KLHL36Q8N4N3 616 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 OR13G1Q8NGZ3 307 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 NSRP1Q9H0G5 558 aaKnown RBP11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 KRCC1Q9NPI7 259 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 TUBG2Q9NRH3 451 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 TMEM100Q9NV29 134 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 CYB5R1Q9UHQ9 305 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 ARL2BPQ9Y2Y0 163 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 N6AMT1Q9Y5N5 214 aa11.21□□□□□ -0.61
NUDCD3-201ENST00000338427 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 B2RBV5 119 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 TNFRSF11BO00300 401 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 SURF4O15260 269 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF12P17014 697 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 RGS6P49758 472 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 HMGA2P52926 109 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 ACTG1P63261 375 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 MS4A2Q01362 244 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 GK2Q14410 553 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 MPPED2Q15777 294 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 PRAMEF6Q5VXH4 476 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF620Q6ZNG0 422 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 BPIFB2Q8N4F0 458 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 SIGLECL1Q8N7X8 197 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 OR4C15Q8NGM1 316 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 OR9Q1Q8NGQ5 310 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 OR2AJ1Q8NGZ0 328 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 GCDHQ92947 438 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 COG8Q96MW5 612 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms