RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GPANK1O95872 356 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 UQCRC1P31930 480 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CLDN20P56880 219 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF684Q5T5D7 378 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 FHL5Q5TD97 284 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 FAAP20Q6NZ36 180 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CCDC28AQ8IWP9 274 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 C9orf40Q8IXQ3 194 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 RASL10BQ96S79 203 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 NICN1Q9BSH3 213 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 EDEM2Q9BV94 578 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 SLC5A7Q9GZV3 580 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 NTMQ9P121 344 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 SPDEFO95238 335 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 GUSBP08236 651 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 GNMTQ14749 295 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CD276Q5ZPR3 534 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 MAMSTRQ6ZN01 415 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF721Q8TF20 911 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 TREM1Q9NP99 234 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 P4HTMQ9NXG6 502 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 D6RAR5 112 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 PLPP3O14495 311 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 SKP2Q13309 424 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 ETFDHQ16134 617 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 BEX5Q5H9J7 111 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 FBXL2Q9UKC9 423 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 LRP12Q9Y561 859 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 TIMM10BQ9Y5J6 103 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CHD3Q12873 2000 aaKnown RBP5.66□□□□□ -1.5
PRKDC-202ENST00000338368 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 ABHD16AO95870 558 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 HLA-AP01891 365 aaKnown RBP5.66□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF44P15621 663 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CPT2P23786 658 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 DSCR4P56555 118 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-202ENST00000338368 TNK1Q13470 666 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 WIPI1Q5MNZ9 446 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CLVS2Q5SYC1 327 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 PRSS42Q7Z5A4 293 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 GABRG1Q8N1C3 465 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 SEMA6DQ8NFY4 1073 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 BANF2Q9H503 90 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 MRM2Q9UI43 246 aaKnown RBP5.66□□□□□ -1.5
PRKDC-202ENST00000338368 FLVCR2Q9UPI3 526 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 CEP192Q8TEP8 1941 aa5.66□□□□□ -1.5
PRKDC-202ENST00000338368 hCG_1807616A0A1W2PRN6 198 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 RFC3P40938 356 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 EFNA3P52797 238 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 STARD6P59095 220 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 FAM71CQ8NEG0 241 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 VRK1Q99986 396 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-202ENST00000338368 PBOV1Q9GZY1 135 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 LANCL2Q9NS86 450 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 CTLA4P16410 223 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 MYBPHQ13203 477 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 CDK10Q15131 360 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 ACTBL2Q562R1 376 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 DCUN1D4Q92564 292 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 EHFQ9NZC4 300 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 SCN10AQ9Y5Y9 1956 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 SPACA5Q96QH8 159 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 PLXNA2O75051 1894 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 IGHV5-10-1A0A0J9YXX1 117 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM229AB2RXF0 380 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 XRCC3O43542 346 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 CX3CR1P49238 355 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 SHBQ15464 509 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 SSX6Q7RTT6 188 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF700Q9H0M5 742 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 PRELID1Q9Y255 219 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 CDAP32320 146 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 PTGS2P35354 604 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 SIGLEC14Q08ET2 396 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF546Q86UE3 836 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 GLCCI1Q86VQ1 547 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 OR2V1Q8NHB1 315 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 BCO1Q9HAY6 547 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 ANXA7P20073 488 aaKnown RBP5.65□□□□□ -1.5
PRKDC-202ENST00000338368 GZMKP49863 264 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 CLDN6P56747 220 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 FOXL2P58012 376 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 DNASE2BQ8WZ79 361 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 TAAR9Q96RI9 348 aa5.65□□□□□ -1.5
PRKDC-202ENST00000338368 BORCS7-ASMTA0A0B4J1R7 106 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 TSPAN4O14817 238 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 SSX4O60224 188 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 THY1P04216 161 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 GAAP10253 952 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 RBP2P50120 134 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 ARSJQ5FYB0 599 aaPredicted RBP5.65□□□□□ -1.51
PRKDC-202ENST00000338368 NAXDQ8IW45 347 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 C12orf4Q9NQ89 552 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 SIRT4Q9Y6E7 314 aaPredicted RBP5.65□□□□□ -1.51
PRKDC-202ENST00000338368 A0A1W2PPH5 198 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 MPZL1O95297 269 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 IGLV3-21P80748 117 aaPredicted RBP5.65□□□□□ -1.51
PRKDC-202ENST00000338368 OPCMLQ14982 345 aa5.65□□□□□ -1.51
PRKDC-202ENST00000338368 CDC20BQ86Y33 519 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms