RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 APOBEC3DQ96AK3 386 aaPredicted RBP13.36□□□□□ -0.27
MUC1-201ENST00000337604 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 MRI1Q9BV20 369 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 SSBP3Q9BWW4 388 aaPredicted RBP13.36□□□□□ -0.27
MUC1-201ENST00000337604 TMEM165Q9HC07 324 aa13.36□□□□□ -0.27
MUC1-201ENST00000337604 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
MUC1-201ENST00000337604 ANOS1P23352 680 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 FOXL1Q12952 345 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 SMARCD3Q6STE5 483 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 RBMS3Q6XE24 437 aaKnown RBP13.35□□□□□ -0.27
MUC1-201ENST00000337604 CFAP77Q6ZQR2 320 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 MOGAT3Q86VF5 341 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 JAZF1Q86VZ6 243 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 KLBQ86Z14 1044 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 OR6V1Q8N148 313 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 PARP8Q8N3A8 854 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 SLC26A10Q8NG04 563 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 OR13G1Q8NGZ3 307 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 FANK1Q8TC84 345 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 TMEM246Q9BRR3 403 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 DCAF13Q9NV06 445 aaKnown RBP13.35□□□□□ -0.27
MUC1-201ENST00000337604 RPS6KA6Q9UK32 745 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 AURKCQ9UQB9 309 aa13.35□□□□□ -0.27
MUC1-201ENST00000337604 IGHV2-70DA0A0C4DH43 119 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 IFNL4K9M1U5 179 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 PLATP00750 562 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 SEMG1P04279 462 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 HLA-DPB1P04440 258 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 RNASE1P07998 156 aaKnown RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 CRABP1P29762 137 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 PSME3P61289 254 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 BAMBIQ13145 260 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 ZNF181Q2M3W8 571 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 ZNF404Q494X3 552 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 PRR31Q5SQ13 230 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 SLC18B1Q6NT16 456 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 SLC27A4Q6P1M0 643 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 C9orf139Q6ZV77 190 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 LINC00346Q8IVM7 164 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 GJC3Q8NFK1 279 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 OR5L1Q8NGL2 311 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 ZNF582Q96NG8 517 aaPredicted RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 ERMAPQ96PL5 475 aaPredicted RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 NMNAT3Q96T66 252 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 OR52D1Q9H346 318 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 B9D1Q9UPM9 204 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
MUC1-201ENST00000337604 V9GYQ6 96 aa13.34□□□□□ -0.27
MUC1-201ENST00000337604 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 MDFIC2A0A1B0GVS7 189 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 KCNAB3O43448 404 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 CCDC22O60826 627 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 ACSM4P0C7M7 580 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 PPIAL4GP0DN37 164 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
MUC1-201ENST00000337604 CENPAP49450 140 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 SRP9P49458 86 aaKnown RBP13.33□□□□□ -0.28
MUC1-201ENST00000337604 MAB21L1Q13394 359 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 GLYATQ6IB77 296 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 DNM1P34Q6PK57 102 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 RNF148Q8N7C7 305 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 OR52E2Q8NGJ4 325 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 MYLK2Q9H1R3 596 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 FN3KQ9H479 309 aa13.33□□□□□ -0.28
MUC1-201ENST00000337604 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
MUC1-201ENST00000337604 CLDN34H7C241 214 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 ARPC3O15145 178 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 FSTL3O95633 263 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 FPR3P25089 353 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 GGT2P36268 569 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 MDH1P40925 334 aaKnown RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 GATA4P43694 442 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 RAD23AP54725 363 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 GNB2P62879 340 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 GK2Q14410 553 aaPredicted RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 SHISA2Q6UWI4 295 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 LYPD2Q6UXB3 125 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 ZBTB46Q86UZ6 589 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 OR4K13Q8NH42 304 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 RAB40AQ8WXH6 277 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 NEIL1Q96FI4 390 aaPredicted RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 MS4A7Q9GZW8 240 aaPredicted RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 SRA1Q9HD15 236 aaKnown RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 SPAG4Q9NPE6 437 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 KRCC1Q9NPI7 259 aaPredicted RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
MUC1-201ENST00000337604 MIOXQ9UGB7 285 aa13.32□□□□□ -0.28
MUC1-201ENST00000337604 SAMD4AQ9UPU9 718 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms