RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PAQR4Q8N4S7 273 aaPredicted RBP20.81■□□□□ 0.92
NDEL1-201ENST00000334527 OR1M1Q8NGA1 313 aa20.81■□□□□ 0.92
NDEL1-201ENST00000334527 FAM46BQ96A09 425 aa20.81■□□□□ 0.92
NDEL1-201ENST00000334527 EDEM2Q9BV94 578 aa20.81■□□□□ 0.92
NDEL1-201ENST00000334527 MYOZ1Q9NP98 299 aaPredicted RBP20.81■□□□□ 0.92
NDEL1-201ENST00000334527 KLHL13Q9P2N7 655 aa20.81■□□□□ 0.92
NDEL1-201ENST00000334527 RFPL4AA6NLU0 287 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 RFPL4AL1F8VTS6 287 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 RAB27BO00194 218 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 RPA2P15927 270 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 LAP3P28838 519 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 GPR85P60893 370 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 UNC119Q13432 240 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 PLPPR5Q32ZL2 321 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 CDNFQ49AH0 187 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 FAM69BQ5VUD6 431 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 GPAT4Q86UL3 456 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 CD163Q86VB7 1156 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 CHST4Q8NCG5 386 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 MRGPRX4Q96LA9 322 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 WDR77Q9BQA1 342 aaPredicted RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 PTGES2Q9H7Z7 377 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 FANCFQ9NPI8 374 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 SPEF1Q9Y4P9 236 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 ADAMTS9Q9P2N4 1935 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 MFSD2BA6NFX1 497 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 DISC1C4P0D8 188 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 ETV2O00321 342 aaPredicted RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 SMAD9O15198 467 aaKnown RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 SCRG1O75711 98 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 EMP2P54851 167 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 ACY1Q03154 408 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 DHRS2Q13268 280 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 MEF2DQ14814 521 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 CLVS2Q5SYC1 327 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 SLC22A24Q8N4F4 322 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 RNF138Q8WVD3 245 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 EDAQ92838 391 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 MRPL13Q9BYD1 178 aaKnown RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 TMEM185BQ9H7F4 350 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 METTL7AQ9H8H3 244 aa20.8■□□□□ 0.92
NDEL1-201ENST00000334527 ZNF230Q9UIE0 474 aaPredicted RBP20.8■□□□□ 0.92
NDEL1-201ENST00000334527 TRAV14DV4A0A0A6YYC5 116 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 CPED1A4D0V7 1026 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 CALCRP30988 508 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 CLDN6P56747 220 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 CLRN1P58418 232 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 SHBQ15464 509 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 RNASE10Q5GAN6 216 aaKnown RBP20.79■□□□□ 0.92
NDEL1-201ENST00000334527 CFAP77Q6ZQR2 320 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 OR5L2Q8NGL0 311 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 POC1BQ8TC44 478 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 TOX3O15405 576 aaPredicted RBP20.79■□□□□ 0.92
NDEL1-201ENST00000334527 PHF19Q5T6S3 580 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 UEVLDQ8IX04 471 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 BEST3Q8N1M1 668 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 OR10G3Q8NGC4 313 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 TTYH1Q9H313 450 aaPredicted RBP20.79■□□□□ 0.92
NDEL1-201ENST00000334527 SEC61A2Q9H9S3 476 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 SDHAF3Q9NRP4 125 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 COQ3Q9NZJ6 369 aa20.79■□□□□ 0.92
NDEL1-201ENST00000334527 PHF3Q92576 2039 aaKnown RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 BPNT1O95861 308 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 LIPCP11150 499 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 CD34P28906 385 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 CXADRP78310 365 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 THEM4Q5T1C6 240 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 GVQW1Q8N7I0 195 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 OR13C9Q8NGT0 318 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 UBE2ZQ9H832 354 aaPredicted RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 MED9Q9NWA0 146 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 FBXL2Q9UKC9 423 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 VSIG4Q9Y279 399 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 POLR1DQ9Y2S0 133 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 KCNMB2Q9Y691 235 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 LOC100509620A0A075B734 347 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 HLA-AP01891 365 aaKnown RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 VSIG8P0DPA2 414 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 MSX1P28360 303 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 PTGDSP41222 190 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 DCDP81605 110 aaKnown RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 QRFPP83859 136 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 INPP5JQ15735 1006 aaPredicted RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 SMAD2Q15796 467 aaKnown RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 SLC25A53Q5H9E4 307 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 ZNF660Q6AZW8 331 aaPredicted RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 OR5D14Q8NGL3 314 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 PRRT1Q99946 306 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 UQCC2Q9BRT2 126 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 NOP16Q9Y3C1 178 aaKnown RBP20.78■□□□□ 0.92
NDEL1-201ENST00000334527 WIF1Q9Y5W5 379 aa20.78■□□□□ 0.92
NDEL1-201ENST00000334527 OR14I1A6ND48 311 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 OR2J2O76002 312 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 RAB3AP20336 220 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 WDR45BQ5MNZ6 344 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 OR52W1Q6IF63 320 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 CPEB2Q7Z5Q1 589 aaKnown RBP20.77■□□□□ 0.92
NDEL1-201ENST00000334527 SPEM1Q8N4L4 309 aa20.77■□□□□ 0.92
NDEL1-201ENST00000334527 OR5M8Q8NGP6 311 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms